Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq4 170 4e-37 seq6 123 6e-23 seq8 118 2e-21 >seq4 Length=1192607 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| | || || || ||||| || || ||||| | ||| || || ||||| ||| Sbjct 498827 ACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCC 498768 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | |||||| || ||||| || | | |||||| ||||| |||| |||||||| |||||| Sbjct 498767 AACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCCTGG 498708 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| ||| ||||| |||||||| |||||| ||||||||| |||||||| ||||| Sbjct 498707 ATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGTGATGGTCTTG 498648 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || | |||||| || || | ||||||||| Sbjct 498647 CCGGTTAAAGTCTTGACGAAAATCTGCATTTT 498616 Score = 163 bits (180), Expect = 7e-35 Identities = 155/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| ||||| ||||||||||| || || | ||| || || ||||| |||| |||||| || Sbjct 499044 AGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAACTGCTTACC 498985 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||||| || || | ||| |||||||| |||| |||||||| ||||||||||| ||| Sbjct 498984 AGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTATCCTGGATCTTGGATTT 498925 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 ||||| |||||||| |||||| ||| || || | ||||| ||||| || || ||||| Sbjct 498924 AACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGT 498865 Query 211097 CTTTACAAACACCTGCAT 211114 ||| || || | |||||| Sbjct 498864 CTTGACGAAGATCTGCAT 498847 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || | ||| || |||||||| ||||||||||| || || | ||| || || Sbjct 499748 AGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499689 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| |||| |||||| || ||||| || || | ||| |||||||| || | |||||| Sbjct 499688 CCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCC 499629 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || ||||| ||| ||||| || || |||||||| |||||||| | |||| Sbjct 499628 TTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTG 499569 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | |||||| || || | |||||| Sbjct 499568 ATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| ||||| ||||| ||||| || || | ||| || || ||||| |||| ||||| || Sbjct 499500 AGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAATTGCTTACC 499441 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||||| || | | ||||||||| || |||| ||||||||||| || ||||| ||| Sbjct 499440 GGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTT 499381 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 ||||| || || |||||||| |||||||| | ||| || ||||| || || ||||| Sbjct 499380 GACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAGTCTTACCGGTTAGAGT 499321 Query 211097 CTTTACAAACACCTGCAT 211114 ||| || || | |||||| Sbjct 499320 CTTGACGAAGATCTGCAT 499303 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||| || || ||||| | ||| || || ||||| |||| ||||| || Sbjct 499955 GTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAATTGCTTACCG 499896 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || | | ||| |||||||| |||| ||||||||||| || ||||| || Sbjct 499895 GCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTA 499836 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| |||||||| |||||| ||| || || | ||||| ||||| || || |||||| Sbjct 499835 ACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGTC 499776 Query 211098 TTTACAAACACCTGCAT 211114 || || || | |||||| Sbjct 499775 TTGACGAAGATCTGCAT 499759 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||| || || ||||| | ||| || || ||||| |||| ||||| || Sbjct 499271 GTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAATTGCTTACCG 499212 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || | | ||| |||||||| |||| ||||||||||| || ||||| ||| Sbjct 499211 GCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTTG 499152 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || |||||||| |||||| ||| || || | || || ||||| || || | |||| Sbjct 499151 ACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTAATAGTCTTACCTGTCAAAGTC 499092 Query 211098 TTTACAAACACCTGCAT 211114 || || || | |||||| Sbjct 499091 TTGACGAAAATCTGCAT 499075 >seq6 Length=1504611 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||| ||||| || || | | ||| || |||||||||| ||||| || Sbjct 86269 GTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCA 86210 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| | | ||||||||||||||||| ||||||||||| || ||||| || Sbjct 86209 GCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTG 86150 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| || |||||||| || ||| || || | ||| || ||||| || || | ||| Sbjct 86149 ACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGTCTTACCAGTCAAGGTC 86090 Query 211098 TTTACAAA 211105 || ||||| Sbjct 86089 TTCACAAA 86082 >seq8 Length=1564113 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| ||||||||||| || || | | || || |||||||||| ||||| || Sbjct 561036 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCA 561095 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| | | |||||||||||| || | || |||||||| |||||||| || Sbjct 561096 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTG 561155 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || ||||| |||||||| || || || || || || ||||| || || | ||| Sbjct 561156 ACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATTGTCTTACCGGTTAAGGTC 561215 Query 211098 TTTACAAACACCTGCATTTT 211117 || ||||| | ||||| || Sbjct 561216 TTAACAAAAATTTGCATCTT 561235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151881186920