Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq4 170 4e-37
seq6 123 6e-23
seq8 118 2e-21
>seq4
Length=1192607
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| ||||| | || || || ||||| || || ||||| | ||| || || ||||| |||
Sbjct 498827 ACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCC 498768
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
| |||||| || ||||| || | | |||||| ||||| |||| |||||||| ||||||
Sbjct 498767 AACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCCTGG 498708
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| ||| ||||| |||||||| |||||| ||||||||| |||||||| |||||
Sbjct 498707 ATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGTGATGGTCTTG 498648
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || | |||||| || || | |||||||||
Sbjct 498647 CCGGTTAAAGTCTTGACGAAAATCTGCATTTT 498616
Score = 163 bits (180), Expect = 7e-35
Identities = 155/198 (78%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||| ||||| ||||||||||| || || | ||| || || ||||| |||| |||||| ||
Sbjct 499044 AGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAACTGCTTACC 498985
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
||||| || || | ||| |||||||| |||| |||||||| ||||||||||| |||
Sbjct 498984 AGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTATCCTGGATCTTGGATTT 498925
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
||||| |||||||| |||||| ||| || || | ||||| ||||| || || |||||
Sbjct 498924 AACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGT 498865
Query 211097 CTTTACAAACACCTGCAT 211114
||| || || | ||||||
Sbjct 498864 CTTGACGAAGATCTGCAT 498847
Score = 159 bits (176), Expect = 8e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| | || | ||| || |||||||| ||||||||||| || || | ||| || ||
Sbjct 499748 AGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499689
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| |||||| || ||||| || || | ||| |||||||| || | ||||||
Sbjct 499688 CCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCC 499629
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| || ||||| ||| ||||| || || |||||||| |||||||| | ||||
Sbjct 499628 TTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTG 499569
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || | |||||| || || | ||||||
Sbjct 499568 ATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||| ||||| ||||| ||||| || || | ||| || || ||||| |||| ||||| ||
Sbjct 499500 AGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAATTGCTTACC 499441
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
||||| || | | ||||||||| || |||| ||||||||||| || ||||| |||
Sbjct 499440 GGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTT 499381
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
||||| || || |||||||| |||||||| | ||| || ||||| || || |||||
Sbjct 499380 GACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAGTCTTACCGGTTAGAGT 499321
Query 211097 CTTTACAAACACCTGCAT 211114
||| || || | ||||||
Sbjct 499320 CTTGACGAAGATCTGCAT 499303
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || || ||||| || || ||||| | ||| || || ||||| |||| ||||| ||
Sbjct 499955 GTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAATTGCTTACCG 499896
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
||||| || | | ||| |||||||| |||| ||||||||||| || ||||| ||
Sbjct 499895 GCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTA 499836
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| |||||||| |||||| ||| || || | ||||| ||||| || || ||||||
Sbjct 499835 ACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGTC 499776
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | ||||||
Sbjct 499775 TTGACGAAGATCTGCAT 499759
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || || ||||| || || ||||| | ||| || || ||||| |||| ||||| ||
Sbjct 499271 GTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAATTGCTTACCG 499212
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
||||| || | | ||| |||||||| |||| ||||||||||| || ||||| |||
Sbjct 499211 GCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTTG 499152
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| || |||||||| |||||| ||| || || | || || ||||| || || | ||||
Sbjct 499151 ACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTAATAGTCTTACCTGTCAAAGTC 499092
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | ||||||
Sbjct 499091 TTGACGAAAATCTGCAT 499075
>seq6
Length=1504611
Score = 123 bits (136), Expect = 6e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || || ||||| ||||| || || | | ||| || |||||||||| ||||| ||
Sbjct 86269 GTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCA 86210
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| | | ||||||||||||||||| ||||||||||| || ||||| ||
Sbjct 86209 GCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTG 86150
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| || |||||||| || ||| || || | ||| || ||||| || || | |||
Sbjct 86149 ACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGTCTTACCAGTCAAGGTC 86090
Query 211098 TTTACAAA 211105
|| |||||
Sbjct 86089 TTCACAAA 86082
>seq8
Length=1564113
Score = 118 bits (130), Expect = 2e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| ||||| ||||||||||| || || | | || || |||||||||| ||||| ||
Sbjct 561036 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCA 561095
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| | | |||||||||||| || | || |||||||| |||||||| ||
Sbjct 561096 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTG 561155
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| || ||||| |||||||| || || || || || || ||||| || || | |||
Sbjct 561156 ACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATTGTCTTACCGGTTAAGGTC 561215
Query 211098 TTTACAAACACCTGCATTTT 211117
|| ||||| | ||||| ||
Sbjct 561216 TTAACAAAAATTTGCATCTT 561235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151881186920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |