Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq4 150 4e-31
seq6 141 2e-28
seq8 134 3e-26
seq2 91.5 4e-13
>seq4
Length=1192607
Score = 150 bits (166), Expect = 4e-31
Identities = 166/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| |||| || ||||| | || ||||| ||||| | ||||||||| | | ||||||
Sbjct 498836 AGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTG 498777
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || | |||||| |||||||| || | || |||||| || || ||||||||||||
Sbjct 498776 CCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCC 498717
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|| || |||||||| || || |||||||| || |||| ||| || || | |||
Sbjct 498716 TTATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGTG 498657
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| |||||||| || ||||| || | ||| | ||||||||
Sbjct 498656 ATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCATTTT 498616
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| |||| || | ||| | || ||||| ||||| | ||||||||| | | ||||||
Sbjct 499292 AGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTG 499233
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || | ||||| || ||||| || | || ||| ||||| || ||||||||||||
Sbjct 499232 CCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCC 499173
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| ||||| || ||| |||||||| || |||| ||| || || || ||
Sbjct 499172 TTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTA 499113
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || |||||||| || | ||| | |||||
Sbjct 499112 ATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | || ||||| ||||| | ||||||||| | | |||||| ||
Sbjct 499974 TCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCC 499915
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||| || | ||||| || ||||| || | || ||| ||||| || ||||||||||||||
Sbjct 499914 ATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTT 499855
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||| || |||||||| || |||| ||| || || || |||||
Sbjct 499854 GTCTTGAATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGAT 499795
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || | ||| || | ||| | |||||
Sbjct 499794 GGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||| || | || | ||| || || ||||||| ||||| || | | |||||
Sbjct 499064 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499005
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || | |||||| |||||||| || |||| ||| ||||| || ||||||||||||
Sbjct 499004 CCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCC 498945
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|| || |||||||| || || |||||||| || |||| ||| || || || |||
Sbjct 498944 TTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTG 498885
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || || | ||| || | ||| | |||||
Sbjct 498884 ATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||| || | |||||| ||||| || ||||||| ||||| || | | |||||
Sbjct 499748 AGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499689
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || | |||||| || ||||| || |||| ||| ||||| || || |||||||||
Sbjct 499688 CCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCC 499629
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| ||||| || || || || ||||| || | || || || || |||
Sbjct 499628 TTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTG 499569
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || || ||||| || | ||| | |||||
Sbjct 499568 ATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
Score = 105 bits (116), Expect = 2e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||| || | || | ||| || || ||||| | ||||| || | | |||||
Sbjct 499520 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTG 499461
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || | ||||| || ||||| || | || ||||||||| || ||||||||||||
Sbjct 499460 CCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 499401
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| ||||| || || || || ||||| || | || || || || ||
Sbjct 499400 TTGTCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTA 499341
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || || | ||| || | ||| | |||||
Sbjct 499340 ATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303
>seq6
Length=1504611
Score = 141 bits (156), Expect = 2e-28
Identities = 152/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | || ||||| ||||| | ||||| || | ||| ||||| ||
Sbjct 86288 TCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCC 86229
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 86228 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTT 86169
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||| || || ||||||||||| | ||| || || || || ||
Sbjct 86168 GTCTTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAAT 86109
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || ||||| || ||
Sbjct 86108 GGTCTTACCAGTCAAGGTCTT 86088
>seq8
Length=1564113
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | || || || ||||||| ||||| || | ||||||||| ||
Sbjct 561017 TCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 561076
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || || ||||| |||||
Sbjct 561077 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 561136
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| ||||| ||||| || | || || || | || ||
Sbjct 561137 GTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAAT 561196
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || || || || | || | |||||| ||
Sbjct 561197 TGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCATCTT 561235
>seq2
Length=1086951
Score = 91.5 bits (100), Expect = 4e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||||||||| || ||||| || || |||||||||||||| ||||||||
Sbjct 805149 GAAAATTTGACCATCAGTAATGGAAATAACGTTAGTTGGGATATAAGCAGACACATCACC 805208
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||| | | || || || || | || ||||||||
Sbjct 805209 ACCTTGAGTTTCAATGATTGGCAAAGCAGTCAAAGAACCACCACC 805253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192531077765552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |