Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 8e-16 seq6 93.3 3e-14 seq4 91.5 1e-13 >seq8 Length=1564113 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| || |||| |||||| || || || ||||| || ||||| || | | Sbjct 561006 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 561065 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| || |||||||||||| || || ||| | || | ||||||||||| || Sbjct 561066 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 561125 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | || || ||||| || || || |||| | | | || || | ||| | Sbjct 561126 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 561185 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | |||||| || || || || || || |||| |||||||||||| Sbjct 561186 TCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 561232 >seq6 Length=1504611 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| || |||| |||||| || ||||| |||||||| ||||| || | | Sbjct 86299 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGAC 86240 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| || |||||||||||| || || ||| | || | ||||||||||| || Sbjct 86239 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGA 86180 Query 101132 ACGCCTTCTTTGTC 101145 | ||||| ||||| Sbjct 86179 ATACCTTCCTTGTC 86166 >seq4 Length=1192607 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 101024 CTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAA 101083 || || |||| ||| || || ||||| ||||||||||||||||| | | |||| || | Sbjct 499289 CTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCA 499230 Query 101084 TCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTG 101143 || |||||||| || || || | || | ||||| ||||| || | ||||| ||| Sbjct 499229 TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTG 499170 Query 101144 TCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATA 101203 || ||| || ||| |||| | | | || || | ||| ||| | ||||||| Sbjct 499169 TCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTAATA 499110 Query 101204 GTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || ||||| || || | ||||| ||||| Sbjct 499109 GTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 101008 ATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATC 101067 ||| || |||| ||||| || |||| ||| || || ||||| ||||||||||||||||| Sbjct 499989 ATTACCACCTCTTAATCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATC 499930 Query 101068 GGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTAC 101127 | | |||| || ||| |||||||| || || || | || | ||||| ||||| Sbjct 499929 AGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGG 499870 Query 101128 GGGCACGCCTTCTTTGTC 101145 || | ||||| ||||| Sbjct 499869 TGGAATACCTTCCTTGTC 499852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409660760058072