Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq8 98.7 8e-16
seq6 93.3 3e-14
seq4 91.5 1e-13
>seq8
Length=1564113
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| |||||| || |||| |||||| || || || ||||| || ||||| || | |
Sbjct 561006 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 561065
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| |||| || |||||||||||| || || ||| | || | ||||||||||| ||
Sbjct 561066 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 561125
Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191
| || || ||||| || || || |||| | | | || || | ||| |
Sbjct 561126 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 561185
Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| | |||||| || || || || || || |||| ||||||||||||
Sbjct 561186 TCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 561232
>seq6
Length=1504611
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| |||||| || |||| |||||| || ||||| |||||||| ||||| || | |
Sbjct 86299 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGAC 86240
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| ||| || |||||||||||| || || ||| | || | ||||||||||| ||
Sbjct 86239 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGA 86180
Query 101132 ACGCCTTCTTTGTC 101145
| ||||| |||||
Sbjct 86179 ATACCTTCCTTGTC 86166
>seq4
Length=1192607
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 101024 CTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAA 101083
|| || |||| ||| || || ||||| ||||||||||||||||| | | |||| || |
Sbjct 499289 CTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCA 499230
Query 101084 TCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTG 101143
|| |||||||| || || || | || | ||||| ||||| || | ||||| |||
Sbjct 499229 TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTG 499170
Query 101144 TCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATA 101203
|| ||| || ||| |||| | | | || || | ||| ||| | |||||||
Sbjct 499169 TCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTAATA 499110
Query 101204 GTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| || || ||||| || || | ||||| |||||
Sbjct 499109 GTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075
Score = 82.4 bits (90), Expect = 6e-11
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 101008 ATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATC 101067
||| || |||| ||||| || |||| ||| || || ||||| |||||||||||||||||
Sbjct 499989 ATTACCACCTCTTAATCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATC 499930
Query 101068 GGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTAC 101127
| | |||| || ||| |||||||| || || || | || | ||||| |||||
Sbjct 499929 AGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGG 499870
Query 101128 GGGCACGCCTTCTTTGTC 101145
|| | ||||| |||||
Sbjct 499869 TGGAATACCTTCCTTGTC 499852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409660760058072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |