Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1 266 3e-66 >seq1 Length=762788 Score = 266 bits (294), Expect = 3e-66 Identities = 561/830 (68%), Gaps = 9/830 (1%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || || |||| |||||||||||| || || || || | || ||||| ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 ||||||||||| || || || || ||||| ||| |||| | ||||| || ||| Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTGAAATACTTTTGATTGCCAAGAGCAACTAGC 619044 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 | || ||| || |||||||| | ||| ||| |||| || ||| ||| || |||| || Sbjct 619045 AGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAGG 619104 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 ||| ||||| || | | ||| | ||||| ||| || || || || || || || Sbjct 619105 GACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGAT 619163 Query 4496 ATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 ||| | | |||||| ||| || || || |||| |||| | | ||| ||| Sbjct 619164 -TCTCTCAACA-ATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCA 619221 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 |||||| || | ||| |||||||||| ||| || || ||||| ||||||| |||||| Sbjct 619222 AAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGC 619281 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || |||||| |||| || ||||| || ||||||||||| || || || ||||| | ||| Sbjct 619282 ATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCT 619341 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCAT 4733 || ||||| ||||| || || |||| | || | ||| ||| | |||||| Sbjct 619342 TCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCAT 619401 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAAT 4793 | | ||||| | || || | ||| | ||||| | | || || || |||| Sbjct 619402 CTGATGGCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAGG 619461 Query 4794 TTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAA 4853 | | || ||||||| || || ||||| || || || || | || || Sbjct 619462 AAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGAG 619521 Query 4854 TGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACT 4913 || || ||||| || ||||| || ||||||||||| | ||||||| | ||||||| Sbjct 619522 TGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAACT 619581 Query 4914 TCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973 ||| | || | || || ||||| ||||| || |||||||| || ||||| || Sbjct 619582 TCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAGAAT 619641 Query 4974 GCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTTCCAGTGGGGC 5030 ||||| ||| | || | ||| | ||||| || | | | || ||||||| | | Sbjct 619642 GCCAACACACGCGAGAGGAAGAAACGTTCGTGCTCGTTCATGCGGTTGTTCCAGTCGTGA 619701 Query 5031 AAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 | ||| || | ||||| | || || | ||||| |||||||| || || Sbjct 619702 ATATCCTTGGACAAATCGATCTCCTCGGCGGTCCAGAACGACGCCTCAGC 619751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049558362664