Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 316 3e-81 seq1 168 9e-37 >seq2 Length=1086951 Score = 316 bits (350), Expect = 3e-81 Identities = 1337/2086 (64%), Gaps = 59/2086 (3%) Strand=Plus/Plus Query 76772 CTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACC 76831 |||||| | ||||| || || | || ||| || | || || | | ||||||||||| Sbjct 389269 CTTATCAATGGTAAATTGGATAGCAGCAGAGGCAGCTTGGGTCCTCAAGTAGTACATACC 389328 Query 76832 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 || || | |||| |||||||||| || ||||| || |||| ||| | || Sbjct 389329 GGTCTTCAAACCCTTCTTCCATCCGTAAAAGTGCATACTGGTCAATTTACCCATTGTTGG 389388 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951 | | ||||| | |||| || || |||||| ||| | | |||||| || Sbjct 389389 AGCACGAATATGCACGTTCAAAGATTGTGATTGATCAATGTAGCAAGAACGATCAGCAGC 389448 Query 76952 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 77011 ||| | ||||| |||||||||| | |||||| | || ||| ||| | || | || Sbjct 389449 CATGTCAATAATTGTCTTTTGAGACAATTCCCAGACTGTCTTGTAAAGGTCCTTCAATTC 389508 Query 77012 ATCTGGAAGGTTTG-TA--TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTAT 77068 | |||| ||| | || |||||||||||||| || || ||||| | ||| || Sbjct 389509 TTGAGGAATGTTGGGTAGGTTTTGAATGGAACCGTTGTCAGAAATAATGTGAGACTTCAT 389568 Query 77069 ATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 | | |||| ||| | | || ||| | | | | | ||||| || ||||| Sbjct 389569 AGCTTCATCCCATAGACCCAAATCCACCAAATCACGCAACAAGTACGGATTGACAATTTG 389628 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 ||||| || || | || | ||| | ||| || || |||||||||||| | | |||| Sbjct 389629 GAATTCACCTGATAGAACACGACGTGAGTACATGTTTGAGGTATATGGTTCGAAACATTC 389688 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 |||| ||||| || || | |||||| ||||||||||| || || | ||| | | || Sbjct 389689 GTTGTAACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATTGGGGCTAGCAACAGAGAGTT 389748 Query 77249 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGG 77308 ||| | ||| | | | | || | || | | | || ||||||||| ||||| | ||| Sbjct 389749 TCTAATACCGTCTTTGATAATGTCTGCTCTCAAAGTTTCCCAATCCCATAGATCAGTAGG 389808 Query 77309 TACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGT 77368 | |||| | || |||| ||||| || | |||| ||||| || |||| Sbjct 389809 TGTCCTGCCCCACATGTCAAATTGAAGAATACCCTCGGCAGCAGGGGATCCCTTGAATGT 389868 Query 77369 TTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCG-------CTTCCAATGCTCCGT 77421 || || || || ||| | || | ||||||| | || | || ||| Sbjct 389869 CTCGTATGGGCCCTCTT------CCAGGGC-CAACTCGTGTGATGCCTCTAGGGCAGCGT 389921 Query 77422 AATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGAT 77481 ||| || || || || | | |||| | |||| || || | || || ||| Sbjct 389922 GATACATAGTCTCAAAGACGTGAATATTCAATTCTTTGGCCTCCTGAGAGTCGAAAGGAA 389981 Query 77482 AATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTC 77541 | | || | || || | ||| || || || ||||| || | | |||||||||| |||| Sbjct 389982 TACGCAACATCATGAAAGTATCGGCCAACCCTTGAACACCCAAAGCAATAGGTCTGTGTC 390041 Query 77542 TCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGA 77601 || | ||||| || | || | || |||||||| ||| ||| || | | | || | Sbjct 390042 TCATGTTGGATCTTCTGGCAGTTTCAACGGGATAATAGTTACGGTCGATGACTCTGTTCA 390101 Query 77602 GATTTC---TAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT-----CA---AA 77650 ||| | | ||||| ||| | | || | ||| || ||| | || | Sbjct 390102 AATTACGGGTGACAAC--CTTGGAA-ATTTCATGTAGCTTCTCAAAGTTGTACCATTGAG 390158 Query 77651 TCTT-CCATCT--ATAA----CAAACA-TGTT--CAAAGCTATAGATGCTAGATTACAAA 77700 |||| || ||| | || ||| | || | ||| || | ||| || | ||||| | Sbjct 390159 TCTTTCCGTCTTCAGAAGTTTCAATGAATGCTGGCAATGCAACAGAAGCCAAGTTACACA 390218 Query 77701 CTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGA 77760 | || || | | | | || | | || || ||| | ||| | | |||| Sbjct 390219 CGGCAGTTTCCTCTGGGGAAGAGTACTCGACGATTTCACAACACAAGTTAGAAGACTTGA 390278 Query 77761 TAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACG 77820 | || || || || | |||||| |||| | || || || || || |||| || || | Sbjct 390279 TGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCATGAATG 390338 Query 77821 GAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATC 77879 |||| |||||||| |||| | ||| | ||| | | ||| | | ||| |||||| || Sbjct 390339 GAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTTCTGAGCTTTGATA 390397 Query 77880 ATAGATTTGTATCGCCTCTCTCTTTCA--TA---TTGAGTATATAGCCGTTCAAATTCAT 77934 | ||| || | | | ||||| || || || | |||| ||| ||| ||||||| Sbjct 390398 GTC--TTTCTACCACGGCCCTCTTGCACGTAACGTTCA-TATAAAGC--TTCGAATTCAT 390452 Query 77935 CTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCAT 77994 | || | ||||| | | || || |||| | ||| | | ||| | ||| ||||| | Sbjct 390453 CACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCACCGT 390512 Query 77995 CTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG 78054 || | ||||| ||||| || | ||| || | |||||||||| || | ||||| || Sbjct 390513 TCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGG 390572 Query 78055 TTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGAT--CGAGAAACTCCATAATATCAGA 78112 | |||||| || || || | |||| ||| ||| ||| || | |||||||| Sbjct 390573 CACGGATTTCTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATCAGA 390630 Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTAT 78172 ||||||||||||| || ||||| | | | || |||| || || || || ||||| | Sbjct 390631 GTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAAC 390690 Query 78173 ATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATT 78232 || | || ||||| || || || | | ||| || |||||||| || || || || || Sbjct 390691 GTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTT 390750 Query 78233 TGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCC 78292 || || | ||| || || | | ||||| || ||| | || || || || Sbjct 390751 GGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCC 390810 Query 78293 TGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTC 78352 || |||| || || | || || |||||| |||||||||||||| || || ||| Sbjct 390811 CGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTC 390870 Query 78353 ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAA 78412 || ||||| | || |||||| |||||| ||| ||||| ||| || || || || Sbjct 390871 CTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAA 390930 Query 78413 TAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGC 78472 ||| || || ||||| || || || || || ||| | |||||||| ||||| | | Sbjct 390931 TAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCAC 390990 Query 78473 TGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCT 78532 | ||| ||||| | || || || || || |||||||| | || ||||||||| | Sbjct 390991 TCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGGACG 391050 Query 78533 TTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAA 78592 ||| | ||| || || | ||||| || ||| | || || |||||||| Sbjct 391051 TTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCAAA 391110 Query 78593 ATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652 |||||||||| |||||||| ||||| | |||| |||| || || | |||||||| | Sbjct 391111 ATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTGCTC 391170 Query 78653 GGTAACAATATCCATGACAGTAGTT-GAAATAATAGGAGATCGTACACCATTTTTAGGAT 78711 | ||||| ||| | | | || ||||| || || || | | ||||||||||| | Sbjct 391171 CATGACAAT-TCCGTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTTAGGGT 391229 Query 78712 TAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTA 78771 | ||||||| | ||||| || || | ||| | || | |||| ||| || | Sbjct 391230 TCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTTATGCA 391289 Query 78772 GATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 | || || | || | ||| || |||| | ||||| ||||| || Sbjct 391290 GGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335 >seq1 Length=762788 Score = 168 bits (186), Expect = 9e-37 Identities = 484/734 (66%), Gaps = 19/734 (3%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || ||| ||| | || ||||| || || || || || |||| || || ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAA-AT 47968 ||||||||||| ||||| || | || |||| |||| | | | || | | Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043 Query 47969 CAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAG 48028 |||||| || ||||| ||||| | |||| ||||| | || ||||| || | || Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103 Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAA-CTCTTGTTCGATAGTGACAGCATCC---ACTA 48084 |||||||| || || | | | | ||||| |||||| |||||| || | | Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162 Query 48085 TTATCGATGTTACCGTTTCCTCA--CTTGGTGGATACAACAAATGTTTAAACATTAAACA 48142 || || | | || ||| |||| | | ||| || ||| | | ||| Sbjct 619163 TTCTCTCAACAATCTTTGGATCAGGCTTGTT-----CTTCAAGTGCGCAAATAGAAGACA 619217 Query 48143 TGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACC 48202 |||||||||| |||||||| || ||||| | ||||| || ||||| || || ||||| Sbjct 619218 TGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACC 619277 Query 48203 GGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATAT 48262 |||||| | || || || ||||| || || || || || ||||| || ||||| | Sbjct 619278 GGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAAC 619337 Query 48263 GCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCGTTGTGTAT 48319 ||||| ||||| ||||| ||| | ||||||| | | || |||||| || || Sbjct 619338 ACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGAT 619397 Query 48320 CCA-CCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 48378 ||| | | || ||||| || ||||||| ||| | ||| || |||| || ||||| | Sbjct 619398 CCATCTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGA 619456 Query 48379 AGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTT 48438 | || || | | || ||| ||||| | ||| || || || | ||| || | | Sbjct 619457 ATAGGAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCT 619516 Query 48439 CGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCT 48498 ||||||| || ||||| || ||||| || |||||||| || | ||||||| ||| | Sbjct 619517 CGGAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTT 619576 Query 48499 GTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAA 48558 | || || | | || || |||| ||||| || || || || || ||||||| Sbjct 619577 GAACTTCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAA 619636 Query 48559 AAAATGCTAATACA 48572 | ||||| || ||| Sbjct 619637 AGAATGCCAACACA 619650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668730533120