Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq2 288 1e-72
seq1 141 1e-28
>seq2
Length=1086951
Score = 288 bits (318), Expect = 1e-72
Identities = 1300/2036 (64%), Gaps = 57/2036 (3%)
Strand=Plus/Plus
Query 75416 TAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTG 75475
||||||||||| || || | |||| |||||||||| || ||||| || || | |||
Sbjct 389318 TAGTACATACCGGTCTTCAAACCCTTCTTCCATCCGTAAAAGTGCATACTGGTCAATTTA 389377
Query 75476 GAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCT 75535
| ||| | ||||| | |||| || || |||||| ||| |
Sbjct 389378 CCCATTGTTGGAGCACGAATATGCACGTTCAAAGATTGTGATTGATCAATGTAGCAAGAA 389437
Query 75536 CTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACT 75595
| |||||| ||||| | ||||| |||||||||| | |||||| | || ||| |||
Sbjct 389438 CGATCAGCAGCCATGTCAATAATTGTCTTTTGAGACAATTCCCAGACTGTCTTGTAAAGG 389497
Query 75596 TGTTTGATATCATCTGGAAGATTTG-TA--TTTTGAATGGATCCGCCATCAGATATAATT 75652
| || | || | |||| || | || ||||||||||| ||| ||||| |||||
Sbjct 389498 TCCTTCAATTCTTGAGGAATGTTGGGTAGGTTTTGAATGGAACCGTTGTCAGAAATAATG 389557
Query 75653 GTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGA 75712
| ||| || | |||| ||| | || ||| | | | | | |||
Sbjct 389558 TGAGACTTCATAGCTTCATCCCATAGACCCAAATCCACCAAATCACGCAACAAGTACGGA 389617
Query 75713 TTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGT 75772
|| |||||||| ||||| || || | || | || | ||| || || ||||||||||
Sbjct 389618 TTGACAATTTGGAATTCACCTGATAGAACACGACGTGAGTACATGTTTGAGGTATATGGT 389677
Query 75773 TCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACC 75832
|| | | |||| |||| ||||| || || | ||| || ||||| ||||| || || | |
Sbjct 389678 TCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATTGGGGCTAGC 389737
Query 75833 AATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAA 75892
|| | | ||||| | ||| | | | | || | || | | | || |||||||||
Sbjct 389738 AACAGAGAGTTTCTAATACCGTCTTTGATAATGTCTGCTCTCAAAGTTTCCCAATCCCAT 389797
Query 75893 AGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGAT 75952
||||| | ||| |||| | || |||| ||||| || | | |||| |||
Sbjct 389798 AGATCAGTAGGTGTCCTGCCCCACATGTCAAATTGAAGAATACCCTCGGCAGCAGGGGAT 389857
Query 75953 CCATTATATGTTTCGTAAGTCCCGTCCTTTTCAG--CTAGTTCGCAACTCGCCTCTAACG 76010
|| || |||| ||||| | || || || ||| | | ||| ||||||| |
Sbjct 389858 CCCTTGAATGTCTCGTATGGGCCCTC--TTCCAGGGCCAACTCGTGTGATGCCTCTAGGG 389915
Query 76011 CACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAA 76070
|| ||| ||| || || || || | | |||| | |||| || || || || |
Sbjct 389916 CAGCGTGATACATAGTCTCAAAGACGTGAATATTCAATTCTTTGGCCTCCTGAGAGTCGA 389975
Query 76071 AAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTC 76130
||||| | | || | || || | ||| || | || ||||| || | | |||||||||
Sbjct 389976 AAGGAATACGCAACATCATGAAAGTATCGGCCAACCCTTGAACACCCAAAGCAATAGGTC 390035
Query 76131 TATGTCTCTTATTGGAAATTT---CAGCTTCTGGAATAGGGTAATAATTAATATCTATAA 76187
| |||||| | ||||| || ||| ||| || || ||||| ||| || || |
Sbjct 390036 TGTGTCTCATGTTGGATCTTCTGGCAGTTTC---AACGGGATAATAGTTACGGTCGATGA 390092
Query 76188 TTTTATTGAGATTTC---TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT--- 76241
| | || | ||| | ||||||| ||| | | || | ||| || ||| |
Sbjct 390093 CTCTGTTCAAATTACGGGTGACAAC--CTTGGAA-ATTTCATGTAGCTTCTCAAAGTTGT 390149
Query 76242 --CA---AAT-TTTCCATCTATCACAAACAT--ATTAAGA--------GCTATAGATGCT 76285
|| | | ||||| ||| ||| || | || || || | ||| ||
Sbjct 390150 ACCATTGAGTCTTTCCGTCT-TCAGAAGTTTCAATGAATGCTGGCAATGCAACAGAAGCC 390208
Query 76286 AGATTACAAACGGC---TACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGA 76342
| ||||| ||||| | |||| | | | || | | || || || |
Sbjct 390209 AAGTTACACACGGCAGTTTCCTCTGGGGAAGAG---TACTCGACGATTTCACAACACAAG 390265
Query 76343 TTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTA 76402
||| | ||||||| || ||||| || | |||||| |||| ||||||| || || ||
Sbjct 390266 TTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTG 390325
Query 76403 TAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT 76462
|||| | || ||||| || ||||| |||| | ||| | ||| | | ||| | | |
Sbjct 390326 TAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTT 390384
Query 76463 CT-AGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCA--TATTGTGTATATAACCGT 76519
|| |||||| || | ||| || | | | ||||| || || || |||||| |
Sbjct 390385 CTGAGCTTTGATAGTC--TTTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCT 390442
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|| |||||||| || | ||||| | | ||| ||| |||| | || | | ||| | |
Sbjct 390443 TCGAATTCATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTC 390502
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| ||||| | || | ||| | ||||| || | ||| || | |||||||||| ||
Sbjct 390503 CATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAAC 390562
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGG--AACTCCA 76697
| ||||| || | |||||| || || || | |||| ||| | | || || |
Sbjct 390563 AAATCTCTGGCACGGATTTCTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGA 390620
Query 76698 TAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTC 76757
|||||||| ||||||||||||| || || || | | |||| |||| || || || |
Sbjct 390621 AGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCAC 390680
Query 76758 CCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAG 76817
| ||||| | || | |||||||| || || || | | ||| || ||||| || || |
Sbjct 390681 CTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCG 390740
Query 76818 ATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGC 76877
| ||||| || || || | ||| || || | |||||| || || | |
Sbjct 390741 AAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATC 390800
Query 76878 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCT 76937
| || || || || | || ||||| | ||||| |||||| || || ||||| || |
Sbjct 390801 CGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTT 390860
Query 76938 CTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997
| || || || ||||| | || |||||| |||||| ||| ||||| ||| |
Sbjct 390861 CGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTAC 390920
Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057
| || || || || || || ||||| |||||||| || || ||| | |||||||| |
Sbjct 390921 CGGCGTTGAATAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGG 390980
Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117
|||| | ||| ||| || || | || || || || || |||||||| | || ||
Sbjct 390981 TTTCGAGCACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAAT 391040
Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177
||||||| |||||| | ||| || || | ||||| || ||| | || |
Sbjct 391041 GCTGAGGACGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCT 391100
Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGT 77237
| |||||||||||||||||| |||||||| ||||| | |||| | || || || | |
Sbjct 391101 TGAAACCAAAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCAT 391160
Query 77238 CCTTATATTTGGTAACAATATCCAT-GACAGTGGTAGAAATAATTGGAGATCGTATTCCA 77296
| || | | | ||||| ||| | || | ||||| || || || | ||||||
Sbjct 391161 CTTTGTGCTCCATGACAAT-TCCGTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCA 391219
Query 77297 TTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTT 77356
|||||||| || ||||||| | || || || || | ||| | || | |||
Sbjct 391220 TTTTTAGGGTTCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTT 391279
Query 77357 TCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412
| ||| || || || || | || | |||||| |||| | ||||||||||| ||
Sbjct 391280 TGCTTATGCAGGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335
>seq1
Length=762788
Score = 141 bits (156), Expect = 1e-28
Identities = 541/836 (65%), Gaps = 24/836 (3%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|||||||| ||| || | || ||||| || || || || || |||| || || |||
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAA-AT 46457
||||||||||| || || || ||||| || |||| |||| | | | || | |
Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043
Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517
|||||| || ||||| ||||| | ||| ||||| | || ||||| || | ||
Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103
Query 46518 TTTGACCGGTAGAGCCTCCGTAAGAAA-CTCTTGTTCAATAGTGACAGCATCCGATATTA 46576
|| ||||| || || | | | | ||||| ||| || |||||| || | || |
Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162
Query 46577 TCGATGTTAC--TGTTTCC-TCA--CTTGGTGGATGCATCAAATGTTTAAACATTAAACA 46631
| || | ||| ||| |||| | | |||| || ||| | | |||
Sbjct 619163 TTCTCTCAACAATCTTTGGATCAGGCTTGTT-----CTTCAAGTGCGCAAATAGAAGACA 619217
Query 46632 TGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCC 46691
|||||||||| ||||| || || ||||| | ||||| || ||||| || || || ||
Sbjct 619218 TGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACC 619277
Query 46692 AGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATAT 46751
||||| | || ||| || ||||| || ||||| || || ||||| || ||||| |
Sbjct 619278 GGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAAC 619337
Query 46752 GCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGG---CATCATTATGAAT 46808
||||| || || || || ||||| | ||||||| | | || | || | || ||
Sbjct 619338 ACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGAT 619397
Query 46809 CCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 46868
||| || ||||| || ||||| | ||| | ||| || |||| || ||||| ||
Sbjct 619398 CCATCTGATGGCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAA 619457
Query 46869 GAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTC 46928
|| || | | || | ||||| | || || || || | ||| || | ||
Sbjct 619458 TAGGAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTC 619517
Query 46929 TGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTG 46988
|| || |||||||| || ||||| || |||||||| || | ||||| | || ||
Sbjct 619518 GGAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTG 619577
Query 46989 TACCTCTGTACAAAATCGTTC-AGA-CAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046
|| || | | || |||| || ||| ||||| || || || || || ||||||
Sbjct 619578 AACTTCGGCTGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCA 619635
Query 47047 AAAAATGCCAATACATG---TTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAG 47103
|| |||||||| ||| | | ||| || | ||| | | | || ||||||
Sbjct 619636 AAGAATGCCAACACACGCGAGAGGAAGAAACGTTCGTGCTCGTTCATGCGGTTGTTCCAG 619695
Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159
|| | ||||| || || | ||| | || || || |||||||| |||||||| ||
Sbjct 619696 TCGTGAATATCCTTGGACAAATCGATCTCCTCGGCGGTCCAGAACGACGCCTCAGC 619751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934328706560
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