Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 4e-19
seq8 104 5e-17
>seq4
Length=1192607
Score = 111 bits (122), Expect = 4e-19
Identities = 160/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| |||||||||||||| || | | ||||| ||||| || |
Sbjct 499737 CAAG-TGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCA 499679
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| |||||||| || || || |||||||| | | ||| |||||||| |||||||
Sbjct 499678 ACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTGTCTTGAA 499619
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||| || | |||| |||| ||| ||| || || | ||| || || || |
Sbjct 499618 TCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTGATGGTCTTAC 499559
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
| || | |||||| ||||| | |||||| ||| |||| |||
Sbjct 499558 CGGTTAAAGTCTTGACGAAAATCTGCATACCACCTCTTAGTCT 499516
Score = 96.9 bits (106), Expect = 8e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| | || | ||| | ||||||||| |||||||||||||| || | | |||
Sbjct 499067 CTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTT 499008
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || | || || ||||| || || || |||||||| | | || |||
Sbjct 499007 CTGCCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCT 498948
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || ||| || | || | | | || || || ||||| |
Sbjct 498947 TCCTTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAG 498888
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || |||||||| ||||||| ||||||
Sbjct 498887 GTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847
>seq8
Length=1564113
Score = 104 bits (114), Expect = 5e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|||||||| |||||||||||||| || | |||||||| |||||||| | || ||
Sbjct 561036 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCA 561095
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| ||||| | || || ||||| | | ||| || ||||| ||||| || || |||
Sbjct 561096 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTG 561155
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
||| | || | |||| ||| ||| |||||||| ||||| || || || || | |||
Sbjct 561156 ACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATTGTCTTACCGGTTAAGGTC 561215
Query 152088 TTCACGAAGACCTGCATTTT 152107
|| || || | ||||| ||
Sbjct 561216 TTAACAAAAATTTGCATCTT 561235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820681733368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |