Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq8 170 4e-37 seq4 170 4e-37 seq6 158 3e-33 >seq8 Length=1564113 Score = 170 bits (188), Expect = 4e-37 Identities = 154/194 (79%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||||| | || | |||||| || | ||| || || |||||| Sbjct 561042 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAG 561101 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | |||||||||| || ||||||||||||||||||||||| | || || | Sbjct 561102 ATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTGACATTG 561161 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||||||||| |||| |||||||| || || || |||||||| || || |||||||| Sbjct 561162 TCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACA 561221 Query 283089 AATATCTGCATTTT 283102 || || ||||| || Sbjct 561222 AAAATTTGCATCTT 561235 >seq4 Length=1192607 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || || ||||| ||||||||||||| |||||| | ||||||||| Sbjct 499511 ACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCC 499452 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || ||||| || ||||| | ||||||||| |||||||| ||||||||||| Sbjct 499451 AATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 499392 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| ||| | || || ||||| |||| || || || | ||| || |||||| Sbjct 499391 ATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAGTCTTA 499332 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | |||||| ||||| |||||||| Sbjct 499331 CCGGTTAGAGTCTTGACGAAGATCTGCAT 499303 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || || ||||||||||||||||||| |||||| | ||||||||| Sbjct 499055 ACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCC 498996 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | || || || || || |||| | ||| |||||| |||||||| ||||| || ||| Sbjct 498995 AACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTATCCTGG 498936 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| ||| | ||||| || || || | ||||||||| | ||||| |||||| Sbjct 498935 ATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTA 498876 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | |||||| ||||| |||||||| Sbjct 498875 CCGGTTAGAGTCTTGACGAAGATCTGCAT 498847 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| || ||| ||||| || ||||| |||| ||| || | ||||||||| Sbjct 499283 ACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCC 499224 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || ||||| || ||||| | ||| |||||| |||||||| ||||||||||| Sbjct 499223 AATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGA 499164 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| || | ||||| || || || | ||||||||| | || || |||||| Sbjct 499163 ATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTAATAGTCTTA 499104 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||| ||||| |||||||| Sbjct 499103 CCTGTCAAAGTCTTGACGAAAATCTGCAT 499075 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || | |||| || ||||||||||||||||||| |||||| | ||||||||| Sbjct 499739 ACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCC 499680 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | || || ||||| || |||| | ||| |||||| || ||||| ||||||||||| Sbjct 499679 AACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTGTCTTGA 499620 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| ||| | || || ||||| |||| || || || | |||||| |||||| Sbjct 499619 ATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTGATGGTCTTA 499560 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || |||||||| ||||| |||||||| Sbjct 499559 CCGGTTAAAGTCTTGACGAAAATCTGCAT 499531 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 ||||| ||||| || ||| ||||| || ||||| |||| ||| || | ||||||||| Sbjct 498827 ACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCC 498768 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | || || || || || ||||| | |||||| ||| |||||||| ||||| || ||| Sbjct 498767 AACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCCTGG 498708 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| ||| | ||||| || || || | ||| || || |||||||| ||||| Sbjct 498707 ATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGTGATGGTCTTG 498648 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||| ||||| ||||||||||| Sbjct 498647 CCGGTTAAAGTCTTGACGAAAATCTGCATTTT 498616 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| || ||| ||||| || ||||| |||| ||| || | ||||||||| Sbjct 499967 ACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCC 499908 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || ||||| || ||||| | ||| |||||| |||||||| ||||||||||| Sbjct 499907 AATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGA 499848 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || ||| | ||||| || || || | ||||||||| | ||||| |||||| Sbjct 499847 ATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTA 499788 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | |||||| ||||| |||||||| Sbjct 499787 CCGGTTAGAGTCTTGACGAAGATCTGCAT 499759 >seq6 Length=1504611 Score = 158 bits (174), Expect = 3e-33 Identities = 147/184 (80%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||| ||||||||||||| |||| || | |||||| || | ||| || || |||| Sbjct 86264 TTCCTTTTGAATGTTGTAGTCAGACAAG-GTTCTGCCATCTTCCAATTGCTTACCAGCAA 86206 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | |||||||||| |||||||| ||||||||||| ||||| | || ||| Sbjct 86205 AGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACGT 86146 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || || ||||| |||| ||||||||| | ||| || |||||||| ||||| ||||| | Sbjct 86145 TGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGTCTTACCAGTCAAGGTCTTCA 86086 Query 283087 CGAA 283090 | || Sbjct 86085 CAAA 86082 Score = 87.8 bits (96), Expect = 4e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 316981 CCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTC-GTCGGGAACCCTTC 317039 ||||| | ||| || || || || ||||| | | | | | ||| || ||||| || || Sbjct 784907 CCGTCAATGTCGTGTTCGACGTAGACAGTTCT-ACATTCTTCTTGAGTTGGGAAACCATC 784849 Query 317040 CAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCA 317099 | |||||||| | || || ||||||| || ||||| |||||||| || || || || Sbjct 784848 AACTTGACCGTTAGCGATAGCTCTCATCAAGGTAGACTTACCAGCACCGTTTGGACCACA 784789 Query 317100 AAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACC 317159 | ||| || | | | |||||| | || | || ||||||| | ||||| | Sbjct 784788 CAAACCGTATCTTCTAGCTCTCTTCAATCTCAATTGAGTCTTGTTCAACAAGATCTTGGC 784729 Query 317160 ACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 ||| || |||| |||||||||||| | ||| ||||| || || Sbjct 784728 ACCGTAGGCCAAAGAGAACTCACAGTTACATAGGTCTTCACC 784687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739092709232