Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq8 170 4e-37
seq4 170 4e-37
seq6 158 3e-33
>seq8
Length=1564113
Score = 170 bits (188), Expect = 4e-37
Identities = 154/194 (79%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||||||||||||||||| | || | |||||| || | ||| || || ||||||
Sbjct 561042 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAG 561101
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | |||||||||| || ||||||||||||||||||||||| | || || |
Sbjct 561102 ATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTGACATTG 561161
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||||||||| |||| |||||||| || || || |||||||| || || ||||||||
Sbjct 561162 TCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACA 561221
Query 283089 AATATCTGCATTTT 283102
|| || ||||| ||
Sbjct 561222 AAAATTTGCATCTT 561235
>seq4
Length=1192607
Score = 170 bits (188), Expect = 4e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| || || ||||| ||||||||||||| |||||| | |||||||||
Sbjct 499511 ACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCC 499452
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || ||||| || ||||| | ||||||||| |||||||| |||||||||||
Sbjct 499451 AATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 499392
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| ||| | || || ||||| |||| || || || | ||| || ||||||
Sbjct 499391 ATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAGTCTTA 499332
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || | |||||| ||||| ||||||||
Sbjct 499331 CCGGTTAGAGTCTTGACGAAGATCTGCAT 499303
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| || || ||||||||||||||||||| |||||| | |||||||||
Sbjct 499055 ACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCC 498996
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| || || || || || |||| | ||| |||||| |||||||| ||||| || |||
Sbjct 498995 AACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTATCCTGG 498936
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| ||| | ||||| || || || | ||||||||| | ||||| ||||||
Sbjct 498935 ATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTA 498876
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || | |||||| ||||| ||||||||
Sbjct 498875 CCGGTTAGAGTCTTGACGAAGATCTGCAT 498847
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| || ||| ||||| || ||||| |||| ||| || | |||||||||
Sbjct 499283 ACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCC 499224
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || ||||| || ||||| | ||| |||||| |||||||| |||||||||||
Sbjct 499223 AATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGA 499164
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | ||||| || || || | ||||||||| | || || ||||||
Sbjct 499163 ATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTAATAGTCTTA 499104
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||| ||||| ||||||||
Sbjct 499103 CCTGTCAAAGTCTTGACGAAAATCTGCAT 499075
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || | |||| || ||||||||||||||||||| |||||| | |||||||||
Sbjct 499739 ACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCC 499680
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| || || ||||| || |||| | ||| |||||| || ||||| |||||||||||
Sbjct 499679 AACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTGTCTTGA 499620
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| ||| | || || ||||| |||| || || || | |||||| ||||||
Sbjct 499619 ATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTGATGGTCTTA 499560
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || |||||||| ||||| ||||||||
Sbjct 499559 CCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
||||| ||||| || ||| ||||| || ||||| |||| ||| || | |||||||||
Sbjct 498827 ACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCC 498768
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| || || || || || ||||| | |||||| ||| |||||||| ||||| || |||
Sbjct 498767 AACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCCTGG 498708
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| ||| | ||||| || || || | ||| || || |||||||| |||||
Sbjct 498707 ATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGTGATGGTCTTG 498648
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||| ||||| |||||||||||
Sbjct 498647 CCGGTTAAAGTCTTGACGAAAATCTGCATTTT 498616
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| || ||| ||||| || ||||| |||| ||| || | |||||||||
Sbjct 499967 ACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCC 499908
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || ||||| || ||||| | ||| |||||| |||||||| |||||||||||
Sbjct 499907 AATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGA 499848
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || ||| | ||||| || || || | ||||||||| | ||||| ||||||
Sbjct 499847 ATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTA 499788
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || | |||||| ||||| ||||||||
Sbjct 499787 CCGGTTAGAGTCTTGACGAAGATCTGCAT 499759
>seq6
Length=1504611
Score = 158 bits (174), Expect = 3e-33
Identities = 147/184 (80%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||| ||||||||||||| |||| || | |||||| || | ||| || || ||||
Sbjct 86264 TTCCTTTTGAATGTTGTAGTCAGACAAG-GTTCTGCCATCTTCCAATTGCTTACCAGCAA 86206
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
||||||| | |||||||||| |||||||| ||||||||||| ||||| | || |||
Sbjct 86205 AGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACGT 86146
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
| || || ||||| |||| ||||||||| | ||| || |||||||| ||||| ||||| |
Sbjct 86145 TGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGTCTTACCAGTCAAGGTCTTCA 86086
Query 283087 CGAA 283090
| ||
Sbjct 86085 CAAA 86082
Score = 87.8 bits (96), Expect = 4e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 316981 CCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTC-GTCGGGAACCCTTC 317039
||||| | ||| || || || || ||||| | | | | | ||| || ||||| || ||
Sbjct 784907 CCGTCAATGTCGTGTTCGACGTAGACAGTTCT-ACATTCTTCTTGAGTTGGGAAACCATC 784849
Query 317040 CAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCA 317099
| |||||||| | || || ||||||| || ||||| |||||||| || || || ||
Sbjct 784848 AACTTGACCGTTAGCGATAGCTCTCATCAAGGTAGACTTACCAGCACCGTTTGGACCACA 784789
Query 317100 AAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACC 317159
| ||| || | | | |||||| | || | || ||||||| | ||||| |
Sbjct 784788 CAAACCGTATCTTCTAGCTCTCTTCAATCTCAATTGAGTCTTGTTCAACAAGATCTTGGC 784729
Query 317160 ACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
||| || |||| |||||||||||| | ||| ||||| || ||
Sbjct 784728 ACCGTAGGCCAAAGAGAACTCACAGTTACATAGGTCTTCACC 784687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739092709232
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