Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4 147 5e-30 seq6 120 7e-22 >seq4 Length=1192607 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || |||||| | || || ||| ||| || Sbjct 498850 CAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCTGAT 498909 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| ||||| ||||| || ||||| || || || ||||||||| Sbjct 498910 ACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAGCAA 498969 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || ||||| || || ||| | || ||||| || || ||| | || || ||| || Sbjct 498970 AGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAACATC 499029 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || || || | ||| | ||||||||||| ||| Sbjct 499030 CAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGA 499068 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||| | || || || || ||||| | ||||| || || ||| Sbjct 499534 CAGATTTTCGTCAAGACTTTAACCGGTAAGACCATCACTTTGGAGGTTGAGTCTTCTGAC 499593 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| |||||||| ||||| ||||| ||||| || ||||||||| Sbjct 499594 ACGATAGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAGCAA 499653 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || |||||||| || ||| | || ||||| || || ||| | || || ||| || Sbjct 499654 AGACTGATTTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAACATC 499713 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || || || || || | ||||||||||| ||| Sbjct 499714 CAAAAGGAGTCCACGCTCCACTTGGTTTTGAGACTAAGA 499752 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || || || | ||||| || || ||| Sbjct 499306 CAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCTGAC 499365 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||||||| |||||||| ||||| ||||| || || || ||||| ||| Sbjct 499366 ACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 499425 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| || || | || ||||| || || ||| | || || ||| | Sbjct 499426 AGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAACATT 499485 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || || || | ||| | ||||||||||| ||| Sbjct 499486 CAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGA 499524 >seq6 Length=1504611 Score = 120 bits (132), Expect = 7e-22 Identities = 157/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||| ||||| || | || || || || || || | || || ||| ||||||||||| Sbjct 86081 TTTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCAT 86140 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || |||||||| |||||||| ||||| ||||| || ||||| ||||| ||| || | Sbjct 86141 TGACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 86200 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAA 178107 ||||| || || || || | |||||||| || || |||| | || || ||| | |||| Sbjct 86201 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAAC-CTTGTCTGACTACAACATTCAAA 86259 Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | ||||| || |||| | ||||||||| | ||| Sbjct 86260 AGGAATCTACCTTGCACTTGGTTTTGAGATTGAGA 86294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731076617552