Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq6 228 1e-54 seq1 170 2e-37 >seq6 Length=784318 Score = 228 bits (252), Expect = 1e-54 Identities = 599/906 (66%), Gaps = 20/906 (2%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| || || | ||||||||||||||| || ||||| ||| || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAAT-CCCAATTCAGAAAT 23962 ||||||||||| | ||||||| || ||||| | ||| | | | ||||| | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAA-CTTGTCATTACCCAAAGCCACCAA 310736 Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022 ||||||||| || ||||| |||| |||| ||||||| || ||||| || | | Sbjct 310737 CAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAA 310796 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 | || || || || | ||| | | || ||||| ||||| ||||| || || Sbjct 310797 TGATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGAT 310856 Query 24083 AGATCTT---ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139 |||| || ||| | | | || || || ||| ||||| |||||| || Sbjct 310857 ---TCTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGC 310913 Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199 ||||| |||| ||| || ||||| | ||| | || |||||||| || | || || Sbjct 310914 AAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGG 310973 Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259 ||| | || |||||| ||||| || |||| ||||| || || || || |||| || Sbjct 310974 CATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACC 311033 Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG-CT--GTCATGTATCCA 24316 ||| || || ||||| || | | |||||| || || || || ||| || ||||| Sbjct 311034 TTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCA 311093 Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 | || ||||| | ||||| | ||| | || || || || || ||||| || | Sbjct 311094 CCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAA 311153 Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436 | | | |||| || || || | || |||||||||| || || | || || Sbjct 311154 AAACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGA 311213 Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496 ||||||||||| || |||||||||||||| |||||| | || || | | | || || Sbjct 311214 GTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCAC 311273 Query 24497 TTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556 ||| | | || ||| | | |||||| || ||||| || || ||||||||||| Sbjct 311274 TTCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAA 311333 Query 24557 CGCCAATACATGTTTTATAAAATA------TTTTTCGTCTGGTGTTAGTTTATTCCAATC 24610 ||| | || | || ||||| ||||||| | || | || |||||||| Sbjct 311334 CGCTAGCACCCGCGATAGGAAATAACGTTCATTTTCGT-TCATG--CGATTGTTCCAATC 311390 Query 24611 ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 24670 | ||||| || |||| ||| | ||| ||| | |||||||| || ||||| || ||| Sbjct 311391 GTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTT 311450 Query 24671 ATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTT 24730 ||| | |||||| ||||| || | || || || | ||| ||||| | ||||| Sbjct 311451 ATAGGCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCTGCGTTTATTTTC 311510 Query 24731 TGCAAG 24736 ||| || Sbjct 311511 TGCCAG 311516 >seq1 Length=1828985 Score = 170 bits (188), Expect = 2e-37 Identities = 687/1076 (64%), Gaps = 16/1076 (1%) Strand=Plus/Minus Query 53950 TTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 54009 ||||||||| |||| |||| | | | ||| ||| |||| ||| | | || | Sbjct 253991 TTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGT 253932 Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069 ||| || || | |||| || | || |||||| | |||||||||||||||||| || Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA--TCGAGGAACGCC 54127 | |||||||| | | |||||| || || || | |||| || || | || | Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814 Query 54128 ATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCT 54187 | ||| || |||||||| || || | ||| | | | | | || || | |||||| || Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754 Query 54188 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 54247 || ||||| | ||| | ||| ||||| || | || | | ||| || |||| ||| ||| Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694 Query 54248 GATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 54307 || | || || || |||| || || || | | ||||| || ||| | Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634 Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 54367 || || || || || |||||||||| | || ||| ||| || || || || ||||| Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574 Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 54427 || || || || |||| | | ||| || ||||| || | | ||| Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514 Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487 || ||||| || || |||||||| || ||||| || | || || | |||||||| Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454 Query 54488 GTCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACA 54545 || || | | | | || | ||| |||||| || || || |||||||| | || Sbjct 253453 GTTTCCAATACCCTGGCGATGT--TGTTGCCATGAATACCGACAGCCACACGCATAATCA 253396 Query 54546 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAG 54605 || || |||||||| | | || ||| ||| | || | |||||| || | | Sbjct 253395 AATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAGGG 253336 Query 54606 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTT 54665 | || || |||||||||||||| ||| || || ||||| | ||| | ||||| || | Sbjct 253335 TCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAGCT 253276 Query 54666 TATCCTTATATTTGTTAACTACATCCATGGTAATACT----TGAAATAATCGGAGAATGT 54721 ||||| | | | || | ||| ||| || || || || || || || Sbjct 253275 CGTCCTTGTTGTCCTGCACGATATC----GTACACCTCCTGGGAGATCATGGGCGAGTGG 253220 Query 54722 TTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttt 54781 | ||||| || || || || || | || | || | ||||| | ||| | || Sbjct 253219 ATTCCATTCTTGGGGTTCACGTAATGGAAAAGTTCGCTTATCACCTGCGAAAACTGCTTG 253160 Query 54782 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGA 54841 | |||| |||||| |||||||| | ||| ||||||||||| | | | || || || ||| Sbjct 253159 GTGGTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCAGGA 253100 Query 54842 TGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTT 54901 || || || | || ||||||| | |||| ||||||| || |||||||| Sbjct 253099 TGAACCGTGGTCATATACGCACAAGTTTCGGCAGCCAGATTGTCCAACTCCACCGTTGTC 253040 Query 54902 ACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCA 54961 || || | || | || ||| | | | | ||||| | | ||| ||||| | | Sbjct 253039 ACACCTTCGTACACACCGGAGATGATCCGCTGTGTAATTTTCACCGCATCGATATGCTTA 252980 Query 54962 GTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 55017 | | || ||||||||||| || || | ||||||||||||||| |||| Sbjct 252979 GGATCCAATCCATAACATAAACGCGAGATGCGTGCTGTGATTTTATCAAATTTGAC 252924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721421883520