Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6 152 5e-32 seq9 87.8 2e-12 >seq6 Length=784318 Score = 152 bits (168), Expect = 5e-32 Identities = 399/606 (66%), Gaps = 11/606 (2%) Strand=Plus/Minus Query 116600 CGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCC 116659 ||| | ||||| | |||||||| | |||| || || |||| || ||| ||| Sbjct 311501 CGCAGATTCGTTCTGTTCCCCATCAAGTACCATGAAATCTGGCAAGCCTATAAACGCGCC 311442 Query 116660 GAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGG--- 116716 ||||||||||| ||||||| ||||| | || || |||||||| | ||| ||| Sbjct 311441 GAGGCGTCGTTTTGGACCGCGGAGGAAATCGATCTATCCAAGGATATACACGATTGGAAC 311382 Query 116717 GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCC 116776 | ||| ||||||| || || || ||||| | || ||||| || ||||| || || Sbjct 311381 AATCGCATGAACGAAAATGAACGTTATTTCCTATCGCGGGTGCTAGCGTTTTTTGCAGCA 311322 Query 116777 AGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCC 116836 || || || |||||||| |||||||| || |||| || || ||||| | Sbjct 311321 TCGGATGGGATAGTCAACGAAAATCTGGTGGAAAATTTCTCTGCTGAAGTGCAAAGTCCG 311262 Query 116837 GAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTAT 116896 || || || || ||||| ||||| ||| ||||| ||| | ||||| || | || Sbjct 311261 GAAGCCAAATGTTTTTACGGATTTCAAATCATGATGGAAAACATTCACTCCGAGACTTAC 311202 Query 116897 TCGACCCTCATCGACACGTACGT----GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAA 116952 ||| || || || || ||| | | | | | | | | || | |||||| || Sbjct 311201 TCGCTACTGATTGATACCTACATCAAGGACCCCAAAGAAAGTG-AGTT---TTTGTTCAA 311146 Query 116953 CGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGC 117012 || ||||| || || ||| ||||||| ||||| | ||||| | | ||||| Sbjct 311145 TGCAATCGAAACTATCCCGCAAATCAAAGAAAAGGCTCAATGGGCCATAAGGTGGATTCA 311086 Query 117013 CGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTT 117072 | | ||| || ||||| || | ||||||| || || || || || || || || Sbjct 311085 AGACGAAGAAGCACTTTTCGGTGAAAGATTGGTGGCTTTTGCAGCTGTTGAAGGTGTTTT 311026 Query 117073 CTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCT 117132 || || || ||| || ||||| || |||||||| || || | ||||| || | Sbjct 311025 TTTCTCAGGTTCTTTTGCAGCCATTTTCTGGCTCAAAAAGAAAGGTTTGATGCCGGGTTT 310966 Query 117133 GACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTT 117192 ||| || ||| |||||||| | ||| || || ||| | ||| || ||||| ||||| Sbjct 310965 GACATTTTCCAATGAGCTCATTTGCAGAGATGAAGGTTTACATACGGATTTTGCGTGTTT 310906 Query 117193 GCTGTT 117198 |||||| Sbjct 310905 GCTGTT 310900 >seq9 Length=718525 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 || || || |||||||| | || || ||| | | |||| | | | | ||||| Sbjct 427465 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCGGACACCATTGACAATGTCAAGTCC 427406 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || |||| ||||| ||||| || || | |||||||| || | |||| ||| || || Sbjct 427405 AAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGAGATTGATCTTCGCTGGTAAG 427346 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| || |||| | ||| | ||||||||||||||||||||| |||| |||| Sbjct 427345 CAGCTTGAAGACGGCAGAACCTTGTCCGACTACAACATCCAGAAGGAATCCACTTTGCAC 427286 Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916 | || ||| | ||||| || || Sbjct 427285 TTGGTCTTGAGATTGAGAGGTGG 427263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219045434240