Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 2e-13 seq3 89.7 6e-13 >seq9 Length=718525 Score = 91.5 bits (100), Expect = 2e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | ||| ||||| ||||| ||| ||||| || || ||||| || | | Sbjct 427263 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 427322 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || | |||| || ||||||||||||||||| || | || ||||||||| | || Sbjct 427323 AAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGA 427382 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| | ||| | || | |||| | | | ||||| ||||| || Sbjct 427383 ATACCCTCCTTGT-CTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAAC 427441 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 43174 || | |||||||| || || || | ||||| ||||| Sbjct 427442 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480 >seq3 Length=955168 Score = 89.7 bits (98), Expect = 6e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | | |||||| ||||| ||| ||||| || || ||||| || | | Sbjct 273711 CCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 273770 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| | |||| || | |||||||||||| || || | || ||| ||||| | || Sbjct 273771 AAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGA 273830 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||||||| ||| | || | |||| | | | ||||| || ||||| Sbjct 273831 ATACCTTCCTTGTCC-TGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCAC 273889 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || | ||||| || || || ||||| ||||| || || |||||||| || Sbjct 273890 CTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTT 273940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817428454720