Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1 113 7e-20 >seq1 Length=1828985 Score = 113 bits (124), Expect = 7e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||||| | ||||| || | ||| ||||| || ||||| || || || Sbjct 1304580 CCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGAC 1304521 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||||| ||| || ||||||||||| |||||||||||||||||||| || || ||| Sbjct 1304520 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304461 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 1304460 ATACCTTCCTTGTCTTG 1304444 Score = 109 bits (120), Expect = 8e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 146060 AGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTG 146119 ||||| | ||||| || | ||| ||||| || |||||| || || || | ||||||| Sbjct 1305027 AGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTG 1304968 Query 146120 CTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCT 146179 | ||| || ||||||||||| |||||||||||||||||||| || || ||||| || || Sbjct 1304967 CCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCC 1304908 Query 146180 TTATCTTG 146187 || ||||| Sbjct 1304907 TTGTCTTG 1304900 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | | ||| | ||||| || | ||| ||||| || || || || || || Sbjct 1304808 CCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGAC 1304749 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||||| ||| || ||||||||||| |||||||||||||||||||| || || ||| Sbjct 1304748 AAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304689 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || ||||| || Sbjct 1304688 ATACCCTCCTTATCCTG 1304672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743526176942080