Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 7e-20
>seq1
Length=1828985
Score = 113 bits (124), Expect = 7e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||||| | ||||| || | ||| ||||| || ||||| || || ||
Sbjct 1304580 CCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGAC 1304521
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||||| ||| || ||||||||||| |||||||||||||||||||| || || |||
Sbjct 1304520 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304461
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 1304460 ATACCTTCCTTGTCTTG 1304444
Score = 109 bits (120), Expect = 8e-19
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 146060 AGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTG 146119
||||| | ||||| || | ||| ||||| || |||||| || || || | |||||||
Sbjct 1305027 AGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTG 1304968
Query 146120 CTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCT 146179
| ||| || ||||||||||| |||||||||||||||||||| || || ||||| || ||
Sbjct 1304967 CCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCC 1304908
Query 146180 TTATCTTG 146187
|| |||||
Sbjct 1304907 TTGTCTTG 1304900
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | | ||| | ||||| || | ||| ||||| || || || || || ||
Sbjct 1304808 CCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGAC 1304749
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||||| ||| || ||||||||||| |||||||||||||||||||| || || |||
Sbjct 1304748 AAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304689
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || ||||| ||
Sbjct 1304688 ATACCCTCCTTATCCTG 1304672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743526176942080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |