Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq6 223 3e-53
>seq6
Length=784318
Score = 223 bits (246), Expect = 3e-53
Identities = 490/729 (67%), Gaps = 14/729 (2%)
Strand=Plus/Plus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || || |||||| ||||| || ||||| || || || ||| ||||| |||
Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063
||||| |||||||||||||| | ||| | || || ||||| ||| |||
Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737
Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123
|||||||| || |||||||| | ||| || ||||| ||||| |||||| || | |||
Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797
Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATA 16183
|| || | || ||| | ||| || | || || | |||||| || | || ||
Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGAT- 310856
Query 16184 TCTCTTACTACACTATTTAACGGAG--GGTTTAAT----AAGTGTTTAAACATTATACAA 16237
|||| | || | ||| ||| || ||| | |||||| ||||| | |||
Sbjct 310857 --TCTTTCAACGATTTTT---GGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACAC 310911
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
|||||||| ||| || ||||| || || | || | ||| || |||||||| | |||
Sbjct 310912 GCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCC 310971
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||| | ||| ||||| | ||| || || || ||||| ||||| || || || | |
Sbjct 310972 GGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACA 311031
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTAC-GTTCTAtttttactttctat 16416
|||||||| || ||||| || ||||||| |||||| | || || || ||| ||
Sbjct 311032 CCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGA-AT 311090
Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476
||| || | ||||| | || |||| ||| | || | || |||||||| ||
Sbjct 311091 CCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAA 311150
Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536
||| | | |||||||| || || || ||||| || |||| || | ||
Sbjct 311151 CAAAAACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTC 311210
Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596
|| ||||| || ||||| || ||||| || ||||| ||| | ||||| | ||||
Sbjct 311211 GGAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTG 311270
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
||||||| | || |||| | | |||||||| ||||| ||||| ||||||||
Sbjct 311271 CACTTCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAA 311330
Query 16657 AAACGCAAG 16665
|||||| ||
Sbjct 311331 AAACGCTAG 311339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511861246400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |