Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq6 226 4e-54 seq1 167 3e-36 >seq6 Length=784318 Score = 226 bits (250), Expect = 4e-54 Identities = 583/884 (66%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| || || | ||||||||||||||| || || || | | || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 |||||||||||||| ||||||| || || |||| || | | ||||| | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 |||||||| || || ||||| | |||| ||||||| || ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530 || || || || | ||| | | || ||||| ||||| | ||| || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857 Query 33531 AATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590 | |||| ||| | | | || || | || ||| ||||| |||||| || ||| Sbjct 310858 CTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAAA 310917 Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650 || || | ||| || ||||| | ||| | || || ||||| || | || ||||| Sbjct 310918 TCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCATC 310977 Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710 | || |||||| ||||| || |||| || || || || || || || | ||||| Sbjct 310978 AAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTCA 311037 Query 33711 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG-CT--GTCATGTATCCACTTT 33767 || || ||||| || | | ||| || || || || || ||| || |||||| || Sbjct 311038 ACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCTT 311097 Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827 ||||| | ||||| | ||| | || || ||||| || ||||| || | | | Sbjct 311098 ATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAAC 311157 Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887 | |||| || || || | || ||||| |||| || || | || || ||| Sbjct 311158 TCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTGA 311217 Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 |||||||| || || ||||||||||| |||||| | || || | | | |||||||| Sbjct 311218 ATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTCA 311277 Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007 | | | || ||| | | |||||| || ||||| ||||| |||||||||||||| Sbjct 311278 GCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGCT 311337 Query 34008 AATACATGTTTTATAAAATA------TTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 34061 | || | || ||||| ||||||| | || | || |||||||| | Sbjct 311338 AGCACCCGCGATAGGAAATAACGTTCATTTTCGT-TCATG--CGATTGTTCCAATCGTGT 311394 Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 34121 ||||| || |||| ||| | ||| ||| | |||||||| || ||||| || |||||| Sbjct 311395 ATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAG 311454 Query 34122 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 | |||||| ||||| || | ||| ||||| | ||| ||||| Sbjct 311455 GCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCT 311498 >seq1 Length=1828985 Score = 167 bits (184), Expect = 3e-36 Identities = 586/906 (65%), Gaps = 18/906 (2%) Strand=Plus/Minus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| || || | |||| || | || |||||| | |||||||||||||||||| || Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCC 63365 | |||||| | | | |||||| || || || | |||| ||| | | || | Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814 Query 63366 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63425 | ||| || |||||||| || || | ||| | || | | | || || | |||||| || Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754 Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485 || ||||| | ||| | ||| ||||| || | || | | ||| || |||| |||||| Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694 Query 63486 GATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGA 63545 || | || || ||||||| || || || | | ||||| || ||| | Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605 || || || || || |||||||||| | || ||| ||| || ||||| || ||||| Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574 Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTT 63665 || || || || |||| | | ||| || ||||| || | | | ||| Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63725 || ||||| || || |||||||| || ||||| || | || || | |||||||| Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454 Query 63726 GTCTC-AATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63782 || || |||| | | | || | ||| |||||| || || || |||||||| | | Sbjct 253453 GTTTCCAATACCCTGG-CGATGTTG--TTGCCATGAATACCGACAGCCACACGCATAATC 253397 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 | || || |||||||| ||| | ||| ||| | | | |||||| || | Sbjct 253396 AAATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAGG 253337 Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 || || || |||||||||||||| ||| || || ||||| | ||| | || || ||| Sbjct 253336 GTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAGC 253277 Query 63903 TTATCCTTATATTTGTTAACTATATCCATGGTAATACT----TGAAATAATCGGAGAATG 63958 | ||||| | | | || ||||| ||| || || || || || || || Sbjct 253276 TCGTCCTTGTTGTCCTGCACGATATC----GTACACCTCCTGGGAGATCATGGGCGAGTG 253221 Query 63959 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 64018 | ||||| || || || || || | ||| | || ||||| | ||| | || Sbjct 253220 GATTCCATTCTTGGGGTTCACGTAATGGAAAAGTTCGCTTATCACCTGCGAAAACTGCTT 253161 Query 64019 ttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64078 | |||| ||||| |||||||| ||||| ||||| ||||| | | | || || || || Sbjct 253160 GGTGGTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCAGG 253101 Query 64079 ATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGT 64138 ||| || || | || ||||||| |||||| ||||||| || |||||||| Sbjct 253100 ATGAACCGTGGTCATATACGCACAAGTTTCGGCAGCCAGATTGTCCAACTCCACCGTTGT 253041 Query 64139 TACTCC 64144 || || Sbjct 253040 CACACC 253035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817411054720