Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq6 226 4e-54
seq1 167 3e-36
>seq6
Length=784318
Score = 226 bits (250), Expect = 4e-54
Identities = 583/884 (66%), Gaps = 12/884 (1%)
Strand=Plus/Plus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| || || | ||||||||||||||| || || || | | || || |||
Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
|||||||||||||| ||||||| || || |||| || | | ||||| | | |
Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
|||||||| || || ||||| | |||| ||||||| || ||||| || | | |
Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797
Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530
|| || || || | ||| | | || ||||| ||||| | ||| || ||
Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857
Query 33531 AATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590
| |||| ||| | | | || || | || ||| ||||| |||||| || |||
Sbjct 310858 CTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAAA 310917
Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650
|| || | ||| || ||||| | ||| | || || ||||| || | || |||||
Sbjct 310918 TCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCATC 310977
Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710
| || |||||| ||||| || |||| || || || || || || || | |||||
Sbjct 310978 AAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTCA 311037
Query 33711 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG-CT--GTCATGTATCCACTTT 33767
|| || ||||| || | | ||| || || || || || ||| || |||||| ||
Sbjct 311038 ACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCTT 311097
Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827
||||| | ||||| | ||| | || || ||||| || ||||| || | | |
Sbjct 311098 ATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAAC 311157
Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887
| |||| || || || | || ||||| |||| || || | || || |||
Sbjct 311158 TCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTGA 311217
Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947
|||||||| || || ||||||||||| |||||| | || || | | | ||||||||
Sbjct 311218 ATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTCA 311277
Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007
| | | || ||| | | |||||| || ||||| ||||| ||||||||||||||
Sbjct 311278 GCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGCT 311337
Query 34008 AATACATGTTTTATAAAATA------TTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 34061
| || | || ||||| ||||||| | || | || |||||||| |
Sbjct 311338 AGCACCCGCGATAGGAAATAACGTTCATTTTCGT-TCATG--CGATTGTTCCAATCGTGT 311394
Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 34121
||||| || |||| ||| | ||| ||| | |||||||| || ||||| || ||||||
Sbjct 311395 ATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAG 311454
Query 34122 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165
| |||||| ||||| || | ||| ||||| | ||| |||||
Sbjct 311455 GCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCT 311498
>seq1
Length=1828985
Score = 167 bits (184), Expect = 3e-36
Identities = 586/906 (65%), Gaps = 18/906 (2%)
Strand=Plus/Minus
Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307
||| || || | |||| || | || |||||| | |||||||||||||||||| ||
Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872
Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCC 63365
| |||||| | | | |||||| || || || | |||| ||| | | || |
Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814
Query 63366 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63425
| ||| || |||||||| || || | ||| | || | | | || || | |||||| ||
Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754
Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485
|| ||||| | ||| | ||| ||||| || | || | | ||| || |||| ||||||
Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694
Query 63486 GATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGA 63545
|| | || || ||||||| || || || | | ||||| || ||| |
Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634
Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605
|| || || || || |||||||||| | || ||| ||| || ||||| || |||||
Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574
Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTT 63665
|| || || || |||| | | ||| || ||||| || | | | |||
Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514
Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63725
|| ||||| || || |||||||| || ||||| || | || || | ||||||||
Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454
Query 63726 GTCTC-AATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63782
|| || |||| | | | || | ||| |||||| || || || |||||||| | |
Sbjct 253453 GTTTCCAATACCCTGG-CGATGTTG--TTGCCATGAATACCGACAGCCACACGCATAATC 253397
Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842
| || || |||||||| ||| | ||| ||| | | | |||||| || |
Sbjct 253396 AAATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAGG 253337
Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902
|| || || |||||||||||||| ||| || || ||||| | ||| | || || |||
Sbjct 253336 GTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAGC 253277
Query 63903 TTATCCTTATATTTGTTAACTATATCCATGGTAATACT----TGAAATAATCGGAGAATG 63958
| ||||| | | | || ||||| ||| || || || || || || ||
Sbjct 253276 TCGTCCTTGTTGTCCTGCACGATATC----GTACACCTCCTGGGAGATCATGGGCGAGTG 253221
Query 63959 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 64018
| ||||| || || || || || | ||| | || ||||| | ||| | ||
Sbjct 253220 GATTCCATTCTTGGGGTTCACGTAATGGAAAAGTTCGCTTATCACCTGCGAAAACTGCTT 253161
Query 64019 ttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64078
| |||| ||||| |||||||| ||||| ||||| ||||| | | | || || || ||
Sbjct 253160 GGTGGTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCAGG 253101
Query 64079 ATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGT 64138
||| || || | || ||||||| |||||| ||||||| || ||||||||
Sbjct 253100 ATGAACCGTGGTCATATACGCACAAGTTTCGGCAGCCAGATTGTCCAACTCCACCGTTGT 253041
Query 64139 TACTCC 64144
|| ||
Sbjct 253040 CACACC 253035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817411054720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |