Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq6 226 3e-54 seq1 114 1e-20 >seq6 Length=784318 Score = 226 bits (250), Expect = 3e-54 Identities = 595/897 (66%), Gaps = 36/897 (4%) Strand=Plus/Plus Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397 |||||| || || ||||| | |||||||||||| |||||||| |||| || || | Sbjct 310617 CTTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTT 310676 Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 ||||| || ||||||||| |||| || | | || ||| ||| || | || Sbjct 310677 TTCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAA 310736 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAA- 11516 |||||||| || || ||||| | ||| ||| ||| ||| ||||| || | | Sbjct 310737 CAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAA 310796 Query 11517 -GATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATC---AATG 11572 ||| || || | ||| || | ||| | || || || | |||||| || |||| Sbjct 310797 TGAT--ACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATG 310854 Query 11573 ATTAT--CGACGTTATAACTTCCTTAGAT--GGTGGATGTAATAAATGTTTAAACATTAA 11628 ||| | | ||| | | || ||| || || | || ||| ||||| || Sbjct 310855 ATTCTTTCAACGATTT-------TTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAA 310907 Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688 |||||||||||| |||||||||||| ||||| | || || ||||| |||||||| || Sbjct 310908 ACACGCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAA 310967 Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAA 11748 || |||||||| ||| ||||| | ||| || || || ||||| ||||| || || || Sbjct 310968 ACCCGGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAA 311027 Query 11749 TATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC--ATATACCTTGTT--GCTAG 11804 | || || ||||||||||| || || | |||||| || | | ||| || || | Sbjct 311028 AACACCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTG 311087 Query 11805 ATATCCATTTTCTGGCCCAATCAGC--TTTCTTT--TTTACGCATTCCATTGTTTCTATA 11860 | ||||| || ||||||| | ||| ||||||| ||| || || ||||| || Sbjct 311088 A-ATCCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCG----GGATAGTTTCGATT 311142 Query 11861 GCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTA 11920 || || || ||| | ||||| | || | | || ||||| || | || Sbjct 311143 GCATTGAACAAAAACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAG 311202 Query 11921 TACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCT 11980 || | || || ||||| |||||||| ||||||||||| || |||||| || || Sbjct 311203 TAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCC 311262 Query 11981 GAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTA 12040 | || || || || || | || ||||| | | ||| || || || || ||||| Sbjct 311263 GGACTTTGCACTTCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGAT 311322 Query 12041 GATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT----TT 12096 | ||||||||| ||||| | | || || || ||| | ||| ||| || || Sbjct 311323 GCTGCAAAAAACGCTAGCACCCGCGATAGGAAATAACGTTCAT-TTTCGTTCATGCGATT 311381 Query 12097 ATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCAC 12156 | |||||| | || ||| || |||| ||| | ||| || |||||||||| ||| | Sbjct 311382 GTTCCAATCGTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTC 311441 Query 12157 TGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213 | ||||||| || |||||| ||||| ||||| || ||||| | |||||| || Sbjct 311442 GGCGCGTTTATAGGCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCT 311498 >seq1 Length=1828985 Score = 114 bits (126), Expect = 1e-20 Identities = 375/583 (64%), Gaps = 0/583 (0%) Strand=Plus/Minus Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027 ||||||| ||| | |||| | | |||| ||| || ||| || | || | || ||| Sbjct 253961 TCCTGGAGCTTCACTTGGAGAGAACAGAGTCCAATCGCCATTTTCCTGGACCCTTTGCAT 253902 Query 38028 AAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087 ||| || ||||| | ||| | || | || |||||| ||| | | ||| || || || Sbjct 253901 AAACAAGTCAGGAATCCAAAGAGCTGGGAACAAATCTCTGGCACGAATTTCCTCCTTACC 253842 Query 38088 TACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT 38147 || || | | | | ||||||||| || || | |||||||| || | || | Sbjct 253841 GTGGTTTTTGCGGATGTCAACAAAATCGAAAATGTCTGAATGCCATGGCTCAAGGTACAG 253782 Query 38148 CGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATA 38207 | | || ||||||||||| | ||| || |||| || || | | | ||||| || | Sbjct 253781 AGCAAAAGCACCTGGTCTTTTGTTACCACCTTGATCAACGTAGCGAGCAGTGTTGTTGAA 253722 Query 38208 TATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACC 38267 | | | ||| || | | ||| || || | |||||| |||||| || |||| || Sbjct 253721 GACACGAATCATGGGGATAAGACCGTTGGAAGTTCCGTTTGTACCGGCAATGTAAGACCC 253662 Query 38268 CTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGC 38327 | | || || || || |||||| || || || ||| ||| || || | ||| Sbjct 253661 GGTCGAGCGAATGTTGTGAATATGCAATCCGATACCGCCCGCAGTTTTAGAGATCATAGC 253602 Query 38328 GCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAA 38387 |||| ||| || || || | || || || || ||| || || || | | | ||| Sbjct 253601 ACATTCTTTCAAAGTGTCGTAAATGCCGTCGATTGAGTCGTCTTTCATAGCCACCAAAAA 253542 Query 38388 ACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTAT 38447 || ||||| || || ||||| ||||| || || || |||||||| ||||| | Sbjct 253541 GCACGACGACATCTGTGGGTGGGGAGTACCGGCATTGAACAACGTAGGAGACGCATGCGT 253482 Query 38448 GAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTG 38507 ||| | || |||| ||| || ||||| | ||| | || | ||| || Sbjct 253481 GAAGTACTTGAGTGACATCAGATTGTAAGTTTCCAATACCCTGGCGATGTTGTTGCCATG 253422 Query 38508 AATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCT 38550 |||||| | || || | ||| | || |||||||||||||||| Sbjct 253421 AATACCGACAGCCACACGCATAATCAAATGTTGTGGTCTTTCT 253379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524659442560