Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 226 3e-54
seq1 114 1e-20
>seq6
Length=784318
Score = 226 bits (250), Expect = 3e-54
Identities = 595/897 (66%), Gaps = 36/897 (4%)
Strand=Plus/Plus
Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397
|||||| || || ||||| | |||||||||||| |||||||| |||| || || |
Sbjct 310617 CTTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTT 310676
Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457
||||| || ||||||||| |||| || | | || ||| ||| || | ||
Sbjct 310677 TTCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAA 310736
Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAA- 11516
|||||||| || || ||||| | ||| ||| ||| ||| ||||| || | |
Sbjct 310737 CAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAA 310796
Query 11517 -GATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATC---AATG 11572
||| || || | ||| || | ||| | || || || | |||||| || ||||
Sbjct 310797 TGAT--ACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATG 310854
Query 11573 ATTAT--CGACGTTATAACTTCCTTAGAT--GGTGGATGTAATAAATGTTTAAACATTAA 11628
||| | | ||| | | || ||| || || | || ||| ||||| ||
Sbjct 310855 ATTCTTTCAACGATTT-------TTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAA 310907
Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688
|||||||||||| |||||||||||| ||||| | || || ||||| |||||||| ||
Sbjct 310908 ACACGCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAA 310967
Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAA 11748
|| |||||||| ||| ||||| | ||| || || || ||||| ||||| || || ||
Sbjct 310968 ACCCGGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAA 311027
Query 11749 TATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC--ATATACCTTGTT--GCTAG 11804
| || || ||||||||||| || || | |||||| || | | ||| || || |
Sbjct 311028 AACACCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTG 311087
Query 11805 ATATCCATTTTCTGGCCCAATCAGC--TTTCTTT--TTTACGCATTCCATTGTTTCTATA 11860
| ||||| || ||||||| | ||| ||||||| ||| || || ||||| ||
Sbjct 311088 A-ATCCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCG----GGATAGTTTCGATT 311142
Query 11861 GCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTA 11920
|| || || ||| | ||||| | || | | || ||||| || | ||
Sbjct 311143 GCATTGAACAAAAACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAG 311202
Query 11921 TACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCT 11980
|| | || || ||||| |||||||| ||||||||||| || |||||| || ||
Sbjct 311203 TAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCC 311262
Query 11981 GAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTA 12040
| || || || || || | || ||||| | | ||| || || || || |||||
Sbjct 311263 GGACTTTGCACTTCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGAT 311322
Query 12041 GATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT----TT 12096
| ||||||||| ||||| | | || || || ||| | ||| ||| || ||
Sbjct 311323 GCTGCAAAAAACGCTAGCACCCGCGATAGGAAATAACGTTCAT-TTTCGTTCATGCGATT 311381
Query 12097 ATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCAC 12156
| |||||| | || ||| || |||| ||| | ||| || |||||||||| ||| |
Sbjct 311382 GTTCCAATCGTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTC 311441
Query 12157 TGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213
| ||||||| || |||||| ||||| ||||| || ||||| | |||||| ||
Sbjct 311442 GGCGCGTTTATAGGCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCT 311498
>seq1
Length=1828985
Score = 114 bits (126), Expect = 1e-20
Identities = 375/583 (64%), Gaps = 0/583 (0%)
Strand=Plus/Minus
Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027
||||||| ||| | |||| | | |||| ||| || ||| || | || | || |||
Sbjct 253961 TCCTGGAGCTTCACTTGGAGAGAACAGAGTCCAATCGCCATTTTCCTGGACCCTTTGCAT 253902
Query 38028 AAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087
||| || ||||| | ||| | || | || |||||| ||| | | ||| || || ||
Sbjct 253901 AAACAAGTCAGGAATCCAAAGAGCTGGGAACAAATCTCTGGCACGAATTTCCTCCTTACC 253842
Query 38088 TACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT 38147
|| || | | | | ||||||||| || || | |||||||| || | || |
Sbjct 253841 GTGGTTTTTGCGGATGTCAACAAAATCGAAAATGTCTGAATGCCATGGCTCAAGGTACAG 253782
Query 38148 CGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATA 38207
| | || ||||||||||| | ||| || |||| || || | | | ||||| || |
Sbjct 253781 AGCAAAAGCACCTGGTCTTTTGTTACCACCTTGATCAACGTAGCGAGCAGTGTTGTTGAA 253722
Query 38208 TATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACC 38267
| | | ||| || | | ||| || || | |||||| |||||| || |||| ||
Sbjct 253721 GACACGAATCATGGGGATAAGACCGTTGGAAGTTCCGTTTGTACCGGCAATGTAAGACCC 253662
Query 38268 CTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGC 38327
| | || || || || |||||| || || || ||| ||| || || | |||
Sbjct 253661 GGTCGAGCGAATGTTGTGAATATGCAATCCGATACCGCCCGCAGTTTTAGAGATCATAGC 253602
Query 38328 GCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAA 38387
|||| ||| || || || | || || || || ||| || || || | | | |||
Sbjct 253601 ACATTCTTTCAAAGTGTCGTAAATGCCGTCGATTGAGTCGTCTTTCATAGCCACCAAAAA 253542
Query 38388 ACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTAT 38447
|| ||||| || || ||||| ||||| || || || |||||||| ||||| |
Sbjct 253541 GCACGACGACATCTGTGGGTGGGGAGTACCGGCATTGAACAACGTAGGAGACGCATGCGT 253482
Query 38448 GAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTG 38507
||| | || |||| ||| || ||||| | ||| | || | ||| ||
Sbjct 253481 GAAGTACTTGAGTGACATCAGATTGTAAGTTTCCAATACCCTGGCGATGTTGTTGCCATG 253422
Query 38508 AATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCT 38550
|||||| | || || | ||| | || ||||||||||||||||
Sbjct 253421 AATACCGACAGCCACACGCATAATCAAATGTTGTGGTCTTTCT 253379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524659442560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |