Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq6 239 6e-58 seq1 178 2e-39 >seq6 Length=784318 Score = 239 bits (264), Expect = 6e-58 Identities = 595/899 (66%), Gaps = 6/899 (1%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| || || | ||||||||||||||| || ||||| ||| || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 ||||||||||| || |||||| || ||||||| || | | ||||| | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 |||||||| || |||||||| | |||| ||||||| || ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 36047 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 36106 || || || || | ||| | | || ||||| ||||| ||||| || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857 Query 36107 GATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 36166 | || ||| | | | || || || ||| ||||| |||||| || ||| Sbjct 310858 CTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAAA 310917 Query 36167 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 36226 || |||| ||| || ||||| | ||| | || |||||||| || | || ||||| Sbjct 310918 TCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCATC 310977 Query 36227 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 36286 | || |||||| ||||| || |||| ||||| || || || || |||| ||||| Sbjct 310978 AAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTCA 311037 Query 36287 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA-CT--GTCATGTATCCACTTT 36343 || || ||||| || | | ||| || || || || || ||| || |||||| || Sbjct 311038 ACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCTT 311097 Query 36344 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 36403 ||||| | ||||| | ||| | || || || || || ||||| || | | | Sbjct 311098 ATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAAC 311157 Query 36404 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 36463 | |||| || || || | || |||||||||| || || | || || ||| Sbjct 311158 TCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTGA 311217 Query 36464 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523 |||||||| || |||||||||||||| |||||| | || || | | | || ||||| Sbjct 311218 ATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTCA 311277 Query 36524 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 36583 | | | || ||| | | |||||| || ||||| || || |||||||||||||| Sbjct 311278 GCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGCT 311337 Query 36584 AATACATGTTTTATAAAATATTTTTC-GTTTGGT--GTTAGTTTATTCCAATCATTGATA 36640 | || | || ||||| ||| ||| || | | || |||||||| | ||| Sbjct 311338 AGCACCCGCGATAGGAAATAACGTTCATTTTCGTTCATGCGATTGTTCCAATCGTGTATA 311397 Query 36641 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 36700 || || |||| ||| | ||| ||| | |||||||| || ||||| || |||||| Sbjct 311398 TCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAGGCT 311457 Query 36701 TTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTTGATTTTTTGCAAG 36759 | |||||| ||||| || | || || || | ||| ||||| || ||||| ||| || Sbjct 311458 TGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCTGCGTTTATTTTCTGCCAG 311516 >seq1 Length=1828985 Score = 178 bits (196), Expect = 2e-39 Identities = 691/1077 (64%), Gaps = 18/1077 (2%) Strand=Plus/Minus Query 65981 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 66040 ||| ||||| |||| |||| | | | ||| ||| |||| ||| | | || | Sbjct 253991 TTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGT 253932 Query 66041 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 66100 ||| || || | |||| || | || |||||| | |||||||||||||||||| || Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872 Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCC 66158 |||||||||| | | |||||| || || || | |||| ||| | | || | Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814 Query 66159 ATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 66218 | ||| || ||||||| || || | ||| | || | | | || || | |||||| || Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754 Query 66219 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 66278 || ||||| | ||| | ||| ||||| || | || | | ||| || |||| ||| ||| Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694 Query 66279 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGA 66338 || || || || || |||| || || || | | ||||| || ||| | Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634 Query 66339 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 66398 || || || || || |||||||||| | || ||| ||| || || || || ||||| Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574 Query 66399 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 66458 || || || || |||| | | ||| || ||||| || | | ||| Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514 Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518 || ||||| || || |||||||| || ||||| || | || || | |||||||| Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454 Query 66519 GTCTC-AATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 66575 || || |||| | | | || | ||| |||||| || || || |||||||| | | Sbjct 253453 GTTTCCAATACCCTGG-CGATGTTG--TTGCCATGAATACCGACAGCCACACGCATAATC 253397 Query 66576 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 66635 | || || |||||||| | | || ||| ||| | | | |||||| || | Sbjct 253396 AAATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAGG 253337 Query 66636 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695 || || || |||||||||||||| ||| || || ||||| | ||| | ||||| || Sbjct 253336 GTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAGC 253277 Query 66696 TTATCCTTATATTTGTTAACTACATCCATGGTAATACT----TGAAATAATCGGAGAATG 66751 | ||||| | | | || | ||| ||| || || || || || || || Sbjct 253276 TCGTCCTTGTTGTCCTGCACGATATC----GTACACCTCCTGGGAGATCATGGGCGAGTG 253221 Query 66752 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 66811 | ||||| || || || || || | ||| | || ||||| | ||| | || Sbjct 253220 GATTCCATTCTTGGGGTTCACGTAATGGAAAAGTTCGCTTATCACCTGCGAAAACTGCTT 253161 Query 66812 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGG 66871 | |||| |||||| |||||||| | ||| ||||||||||| | | | || || || || Sbjct 253160 GGTGGTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCAGG 253101 Query 66872 ATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGT 66931 ||| || || | || ||||||| |||||| ||||||| || |||||||| Sbjct 253100 ATGAACCGTGGTCATATACGCACAAGTTTCGGCAGCCAGATTGTCCAACTCCACCGTTGT 253041 Query 66932 TACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATC 66991 || || | || | || ||| | | | | ||||| | | ||| ||||| | Sbjct 253040 CACACCTTCGTACACACCGGAGATGATCCGCTGTGTAATTTTCACCGCATCGATATGCTT 252981 Query 66992 AGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 67048 || | || ||||||||||| || || | ||||||||||||||| |||| Sbjct 252980 AGGATCCAATCCATAACATAAACGCGAGATGCGTGCTGTGATTTTATCAAATTTGAC 252924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172602548160