Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq6 253 3e-62 seq1 167 3e-36 >seq6 Length=784318 Score = 253 bits (280), Expect = 3e-62 Identities = 589/884 (67%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| || || | ||||||||||||||| || || || | | || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||||||||| ||||||| || ||||||| || | | ||||| | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 |||||||| || |||||||| | |||| ||||||| || ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 || || || || | ||| | | || ||||| ||||| ||||| || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857 Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 | |||| ||| | | | || || || ||| ||||| |||||| || ||| Sbjct 310858 CTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAAA 310917 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 || || | ||| || ||||| | ||| || || |||||||| || | || ||||| Sbjct 310918 TCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCATC 310977 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 | || |||||| ||||| || |||| ||||| || || || || || | ||||| Sbjct 310978 AAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTCA 311037 Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCC-ATAACTGGCGCT--GTCATGTATCCACTTT 50145 || || ||||| || || | ||| || || | || || || ||| || |||||| || Sbjct 311038 ACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCTT 311097 Query 50146 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 50205 ||||| | ||||| | ||| | || || ||||| || ||||| || | | | Sbjct 311098 ATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAAC 311157 Query 50206 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 50265 | |||| || || || | || ||||| |||| || || | || || ||| Sbjct 311158 TCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTGA 311217 Query 50266 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 50325 |||||||| || || ||||||||||| |||||| | || || | | | |||||||| Sbjct 311218 ATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTCA 311277 Query 50326 GTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 50385 | | | || ||| | | |||||| || ||||| || || |||||||||||||| Sbjct 311278 GCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGCT 311337 Query 50386 AATACATGTTTTATAAAAT---GT---TTTTCGTTGGGTGTTAGTTTATTCCAATCATTG 50439 | || | || |||| || |||||||| | | || |||||||| | Sbjct 311338 AGCACCCGCGATAGGAAATAACGTTCATTTTCGTT---CATGCGATTGTTCCAATCGTGT 311394 Query 50440 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 50499 ||||| || |||| ||| | ||| ||| | |||||||| || ||||| || |||||| Sbjct 311395 ATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAG 311454 Query 50500 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 | |||||| ||||| || | ||| ||||| | ||| ||||| Sbjct 311455 GCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCT 311498 >seq1 Length=1828985 Score = 167 bits (184), Expect = 3e-36 Identities = 691/1079 (64%), Gaps = 22/1079 (2%) Strand=Plus/Minus Query 79860 TTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919 ||| ||||| |||| |||| || | | ||| ||| ||| ||| | | || | Sbjct 253991 TTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGT 253932 Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979 ||| || |||| |||| || | || |||||| | |||||||||||||||||| || Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA--TCGAGGAACGCC 80037 | |||||||| | | ||||| || || || | |||| || || | || | Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 | ||| || |||||||| || || | ||| | || | | | || |||| |||||| || Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754 Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157 || ||||| | ||| | ||| ||||| || | || | | ||| || |||| ||| ||| Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694 Query 80158 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 80217 || || || || || |||| || || || | | ||||| || ||| | Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634 Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || || || || || |||||||||| | || ||| ||| || || || || ||||| Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574 Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337 || || || || |||| | | ||| || ||||| || | | ||| Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514 Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397 || ||||| || || |||||||| || ||||| || | || |||| |||||||| Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454 Query 80398 GTCT-CAATA-GCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAA 80453 || | ||||| ||| | || | ||| |||||| || || || |||||||| | Sbjct 253453 GTTTCCAATACCCTG--GCGATGT--TGTTGCCATGAATACCGACAGCCACACGCATAAT 253398 Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513 || || || |||||||| | | || || ||| | | | ||| || || | Sbjct 253397 CAAATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAG 253338 Query 80514 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 || || || |||||||||||||| ||| || || ||||| | ||| | ||||| || Sbjct 253337 GGTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAG 253278 Query 80574 TTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-----GAAATAATCGGAGAA 80628 | ||||| | | | || | ||| || | || | || || || || || Sbjct 253277 CTCGTCCTTGTTGTCCTGCACGATATC----GT-ACACCTCCTGGGAGATCATGGGCGAG 253223 Query 80629 TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 80688 || | ||||| || || || || || | ||| | || ||||| | ||| | Sbjct 253222 TGGATTCCATTCTTGGGGTTCACGTAATGGAAAAGTTCGCTTATCACCTGCGAAAACTGC 253163 Query 80689 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748 || | |||| ||||| |||||||| | ||| ||||| ||||| ||| | || || || Sbjct 253162 TTGGTGGTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCA 253103 Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808 ||||| || || | || ||||||| |||||| ||||||| || |||||| Sbjct 253102 GGATGAACCGTGGTCATATACGCACAAGTTTCGGCAGCCAGATTGTCCAACTCCACCGTT 253043 Query 80809 GTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGA 80868 || || || | || | || ||| | | | | ||||| | | ||| ||||| Sbjct 253042 GTCACACCTTCGTACACACCGGAGATGATCCGCTGTGTAATTTTCACCGCATCGATATGC 252983 Query 80869 TCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 80927 | || | || ||||||||||| || || | |||||||||||||| |||| Sbjct 252982 TTAGGATCCAATCCATAACATAAACGCGAGATGCGTGCTGTGATTTTATCAAATTTGAC 252924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268584519360