Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq6 253 3e-62
seq1 167 3e-36
>seq6
Length=784318
Score = 253 bits (280), Expect = 3e-62
Identities = 589/884 (67%), Gaps = 12/884 (1%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| || || | ||||||||||||||| || || || | | || || |||
Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||||||||| ||||||| || ||||||| || | | ||||| | | |
Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848
|||||||| || |||||||| | |||| ||||||| || ||||| || | | |
Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797
Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908
|| || || || | ||| | | || ||||| ||||| ||||| || ||
Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857
Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968
| |||| ||| | | | || || || ||| ||||| |||||| || |||
Sbjct 310858 CTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAAA 310917
Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028
|| || | ||| || ||||| | ||| || || |||||||| || | || |||||
Sbjct 310918 TCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCATC 310977
Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088
| || |||||| ||||| || |||| ||||| || || || || || | |||||
Sbjct 310978 AAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTCA 311037
Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCC-ATAACTGGCGCT--GTCATGTATCCACTTT 50145
|| || ||||| || || | ||| || || | || || || ||| || |||||| ||
Sbjct 311038 ACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCTT 311097
Query 50146 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 50205
||||| | ||||| | ||| | || || ||||| || ||||| || | | |
Sbjct 311098 ATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAAC 311157
Query 50206 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 50265
| |||| || || || | || ||||| |||| || || | || || |||
Sbjct 311158 TCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTGA 311217
Query 50266 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 50325
|||||||| || || ||||||||||| |||||| | || || | | | ||||||||
Sbjct 311218 ATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTCA 311277
Query 50326 GTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 50385
| | | || ||| | | |||||| || ||||| || || ||||||||||||||
Sbjct 311278 GCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGCT 311337
Query 50386 AATACATGTTTTATAAAAT---GT---TTTTCGTTGGGTGTTAGTTTATTCCAATCATTG 50439
| || | || |||| || |||||||| | | || |||||||| |
Sbjct 311338 AGCACCCGCGATAGGAAATAACGTTCATTTTCGTT---CATGCGATTGTTCCAATCGTGT 311394
Query 50440 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 50499
||||| || |||| ||| | ||| ||| | |||||||| || ||||| || ||||||
Sbjct 311395 ATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAG 311454
Query 50500 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543
| |||||| ||||| || | ||| ||||| | ||| |||||
Sbjct 311455 GCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCT 311498
>seq1
Length=1828985
Score = 167 bits (184), Expect = 3e-36
Identities = 691/1079 (64%), Gaps = 22/1079 (2%)
Strand=Plus/Minus
Query 79860 TTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919
||| ||||| |||| |||| || | | ||| ||| ||| ||| | | || |
Sbjct 253991 TTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGT 253932
Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979
||| || |||| |||| || | || |||||| | |||||||||||||||||| ||
Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872
Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA--TCGAGGAACGCC 80037
| |||||||| | | ||||| || || || | |||| || || | || |
Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814
Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097
| ||| || |||||||| || || | ||| | || | | | || |||| |||||| ||
Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754
Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157
|| ||||| | ||| | ||| ||||| || | || | | ||| || |||| ||| |||
Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694
Query 80158 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 80217
|| || || || || |||| || || || | | ||||| || ||| |
Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634
Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277
|| || || || || |||||||||| | || ||| ||| || || || || |||||
Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574
Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337
|| || || || |||| | | ||| || ||||| || | | |||
Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514
Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397
|| ||||| || || |||||||| || ||||| || | || |||| ||||||||
Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454
Query 80398 GTCT-CAATA-GCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAA 80453
|| | ||||| ||| | || | ||| |||||| || || || |||||||| |
Sbjct 253453 GTTTCCAATACCCTG--GCGATGT--TGTTGCCATGAATACCGACAGCCACACGCATAAT 253398
Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513
|| || || |||||||| | | || || ||| | | | ||| || || |
Sbjct 253397 CAAATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAG 253338
Query 80514 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573
|| || || |||||||||||||| ||| || || ||||| | ||| | ||||| ||
Sbjct 253337 GGTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAG 253278
Query 80574 TTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-----GAAATAATCGGAGAA 80628
| ||||| | | | || | ||| || | || | || || || || ||
Sbjct 253277 CTCGTCCTTGTTGTCCTGCACGATATC----GT-ACACCTCCTGGGAGATCATGGGCGAG 253223
Query 80629 TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 80688
|| | ||||| || || || || || | ||| | || ||||| | ||| |
Sbjct 253222 TGGATTCCATTCTTGGGGTTCACGTAATGGAAAAGTTCGCTTATCACCTGCGAAAACTGC 253163
Query 80689 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748
|| | |||| ||||| |||||||| | ||| ||||| ||||| ||| | || || ||
Sbjct 253162 TTGGTGGTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCA 253103
Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808
||||| || || | || ||||||| |||||| ||||||| || ||||||
Sbjct 253102 GGATGAACCGTGGTCATATACGCACAAGTTTCGGCAGCCAGATTGTCCAACTCCACCGTT 253043
Query 80809 GTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGA 80868
|| || || | || | || ||| | | | | ||||| | | ||| |||||
Sbjct 253042 GTCACACCTTCGTACACACCGGAGATGATCCGCTGTGTAATTTTCACCGCATCGATATGC 252983
Query 80869 TCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 80927
| || | || ||||||||||| || || | |||||||||||||| ||||
Sbjct 252982 TTAGGATCCAATCCATAACATAAACGCGAGATGCGTGCTGTGATTTTATCAAATTTGAC 252924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268584519360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |