Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq6 235 5e-57 >seq6 Length=784318 Score = 235 bits (260), Expect = 5e-57 Identities = 556/828 (67%), Gaps = 29/828 (4%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || || |||||||||||| || || || || ||||| | || || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 13700 ||||| |||||||| ||||| | | || | | || ||| ||| | | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 13701 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13760 ||||||||||||| ||| || | ||||||| ||| ||||| ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 13761 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATA 13820 ||| || | || | ||| | | || || || |||||| | || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857 Query 13821 ATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTT--AAAAATTAAACACGCAA 13878 || || || | || || | |||||| | || | ||| | |||||||||| Sbjct 310858 CTTTCAACGATTT--TTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAA 310915 Query 13879 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13938 |||| ||| | || |||||||| | ||| || || || |||||||| || || |||| Sbjct 310916 AATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCA 310975 Query 13939 TCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCT 13998 |||| ||| ||||| | ||| || || || ||||| || || || || || | || | Sbjct 310976 TCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTT 311035 Query 13999 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCAT 14057 |||| || ||||| || | |||| ||| || || ||||| || || | || ||||| Sbjct 311036 CAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGA-ATCCAC 311094 Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117 || | ||||||| || |||| ||| || || ||||| || ||||| || ||| Sbjct 311095 CTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAA 311154 Query 14118 TATTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTTCA 14174 | || | ||||| || |||| ||||| |||||||| ||| ||| | || | || Sbjct 311155 AACTCACTTTCTTTGGGGTCCTTG--ATGTAGGTATCAATCAGT-AGCGAGTAAGTCTCG 311211 Query 14175 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGT 14234 ||||| ||||||||||| || ||||| || ||||| ||| | ||||||| | ||| Sbjct 311212 GAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGC 311271 Query 14235 ACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14293 ||||| | || |||| |||| ||| |||||| || ||||| ||||| |||||||| Sbjct 311272 ACTTCAGCAGAGAAAT-TTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAA 311330 Query 14294 AAATGC---------CAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT 14344 ||| || | ||| | ||||| | || | ||| || || | || || Sbjct 311331 AAACGCTAGCACCCGCGATAGG----AAATAACG--TTCATTTTCGTTCATGCGATTGTT 311384 Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 ||||||| || |||||| || ||||| | ||| || | |||||||| Sbjct 311385 CCAATCGTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAA 311432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727856081600