Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq6 235 5e-57
>seq6
Length=784318
Score = 235 bits (260), Expect = 5e-57
Identities = 556/828 (67%), Gaps = 29/828 (4%)
Strand=Plus/Plus
Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640
||||| || || |||||||||||| || || || || ||||| | || || || |||
Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677
Query 13641 TCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 13700
||||| |||||||| ||||| | | || | | || ||| ||| | | | |
Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737
Query 13701 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13760
||||||||||||| ||| || | ||||||| ||| ||||| ||||| || | | |
Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797
Query 13761 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATA 13820
||| || | || | ||| | | || || || |||||| | || ||
Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857
Query 13821 ATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTT--AAAAATTAAACACGCAA 13878
|| || || | || || | |||||| | || | ||| | ||||||||||
Sbjct 310858 CTTTCAACGATTT--TTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAA 310915
Query 13879 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13938
|||| ||| | || |||||||| | ||| || || || |||||||| || || ||||
Sbjct 310916 AATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCA 310975
Query 13939 TCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCT 13998
|||| ||| ||||| | ||| || || || ||||| || || || || || | || |
Sbjct 310976 TCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTT 311035
Query 13999 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCAT 14057
|||| || ||||| || | |||| ||| || || ||||| || || | || |||||
Sbjct 311036 CAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGA-ATCCAC 311094
Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117
|| | ||||||| || |||| ||| || || ||||| || ||||| || |||
Sbjct 311095 CTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAA 311154
Query 14118 TATTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTTCA 14174
| || | ||||| || |||| ||||| |||||||| ||| ||| | || | ||
Sbjct 311155 AACTCACTTTCTTTGGGGTCCTTG--ATGTAGGTATCAATCAGT-AGCGAGTAAGTCTCG 311211
Query 14175 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGT 14234
||||| ||||||||||| || ||||| || ||||| ||| | ||||||| | |||
Sbjct 311212 GAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGC 311271
Query 14235 ACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14293
||||| | || |||| |||| ||| |||||| || ||||| ||||| ||||||||
Sbjct 311272 ACTTCAGCAGAGAAAT-TTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAA 311330
Query 14294 AAATGC---------CAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT 14344
||| || | ||| | ||||| | || | ||| || || | || ||
Sbjct 311331 AAACGCTAGCACCCGCGATAGG----AAATAACG--TTCATTTTCGTTCATGCGATTGTT 311384
Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392
||||||| || |||||| || ||||| | ||| || | ||||||||
Sbjct 311385 CCAATCGTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAA 311432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727856081600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |