Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq6 226 3e-54
>seq6
Length=784318
Score = 226 bits (250), Expect = 3e-54
Identities = 554/828 (67%), Gaps = 29/828 (4%)
Strand=Plus/Plus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
||||| || || |||||||||||| ||||| || || ||||| | || || || |||
Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488
||||| ||||| || ||||| | | | || | | || ||| ||| | | | ||
Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737
Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548
||||||||||||| ||| || | ||||||| ||| ||||| ||||| || | | |
Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797
Query 13549 TTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 13608
||| || | || | ||| | | || || || ||||| | || ||
Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857
Query 13609 ATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTT--AAAAATTAAACACGCAA 13666
| | || || | || || | |||||| | || | ||| | ||||||||||
Sbjct 310858 CTTTCAACGATTT--TTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAA 310915
Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726
|||| ||| | || |||||||| | ||| || || || |||||||| || || ||||
Sbjct 310916 AATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCA 310975
Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786
|||| ||| ||||| | ||| || || || || || || || || || || | || |
Sbjct 310976 TCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTT 311035
Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCAT 13845
|||| || ||||| || | | || ||| || || ||||| || || |||| |||||
Sbjct 311036 CAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGA-ATCCAC 311094
Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAA 13905
|| | ||||||| || |||| ||| || || ||||||||||||||||| |||
Sbjct 311095 CTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAA 311154
Query 13906 TGTTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTTCA 13962
|| | ||||| || |||| ||||| |||||||| ||| ||| | || | ||
Sbjct 311155 AACTCACTTTCTTTGGGGTCCTTG--ATGTAGGTATCAATCAGT-AGCGAGTAAGTCTCG 311211
Query 13963 GAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14022
||||| |||||||| || || ||||| || ||||||||| | ||||| | | |||
Sbjct 311212 GAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGC 311271
Query 14023 ACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081
|| || | || |||| |||| ||| ||||| || || || ||||| ||||||||
Sbjct 311272 ACTTCAGCAGAGAAAT-TTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAA 311330
Query 14082 AAATGC---------CAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT 14132
||| || | ||| | ||||| | || | ||| || || | || ||
Sbjct 311331 AAACGCTAGCACCCGCGATAGG----AAATAACG--TTCATTTTCGTTCATGCGATTGTT 311384
Query 14133 CCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180
||||||| || |||||| || ||||| | ||| || | ||||||||
Sbjct 311385 CCAATCGTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAA 311432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588656423360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |