Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq6 226 3e-54 >seq6 Length=784318 Score = 226 bits (250), Expect = 3e-54 Identities = 554/828 (67%), Gaps = 29/828 (4%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || || |||||||||||| ||||| || || ||||| | || || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488 ||||| ||||| || ||||| | | | || | | || ||| ||| | | | || Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548 ||||||||||||| ||| || | ||||||| ||| ||||| ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 13549 TTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 13608 ||| || | || | ||| | | || || || ||||| | || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857 Query 13609 ATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTT--AAAAATTAAACACGCAA 13666 | | || || | || || | |||||| | || | ||| | |||||||||| Sbjct 310858 CTTTCAACGATTT--TTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAA 310915 Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726 |||| ||| | || |||||||| | ||| || || || |||||||| || || |||| Sbjct 310916 AATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCA 310975 Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786 |||| ||| ||||| | ||| || || || || || || || || || || | || | Sbjct 310976 TCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTT 311035 Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCAT 13845 |||| || ||||| || | | || ||| || || ||||| || || |||| ||||| Sbjct 311036 CAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGA-ATCCAC 311094 Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAA 13905 || | ||||||| || |||| ||| || || ||||||||||||||||| ||| Sbjct 311095 CTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAA 311154 Query 13906 TGTTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTTCA 13962 || | ||||| || |||| ||||| |||||||| ||| ||| | || | || Sbjct 311155 AACTCACTTTCTTTGGGGTCCTTG--ATGTAGGTATCAATCAGT-AGCGAGTAAGTCTCG 311211 Query 13963 GAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14022 ||||| |||||||| || || ||||| || ||||||||| | ||||| | | ||| Sbjct 311212 GAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGC 311271 Query 14023 ACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081 || || | || |||| |||| ||| ||||| || || || ||||| |||||||| Sbjct 311272 ACTTCAGCAGAGAAAT-TTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAA 311330 Query 14082 AAATGC---------CAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT 14132 ||| || | ||| | ||||| | || | ||| || || | || || Sbjct 311331 AAACGCTAGCACCCGCGATAGG----AAATAACG--TTCATTTTCGTTCATGCGATTGTT 311384 Query 14133 CCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 ||||||| || |||||| || ||||| | ||| || | |||||||| Sbjct 311385 CCAATCGTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAA 311432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588656423360