Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq6 214 2e-50 seq1 152 7e-32 >seq6 Length=784318 Score = 214 bits (236), Expect = 2e-50 Identities = 583/887 (66%), Gaps = 18/887 (2%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || || | ||||||||||||||| ||||| || | | || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||||||||| ||||||| || ||||||| || | | ||||| | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 |||||||| || | ||||| | |||| ||||||| || ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 || || || || | ||| | | || ||||| ||||| ||||| || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGAT- 310856 Query 42014 GATCTT---ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 42070 |||| || ||| | | | || || || ||| ||||| |||||| || Sbjct 310857 --TCTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCA 310914 Query 42071 AAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 42130 ||||| || | ||| |||||||| | ||| | || |||||||| || | || ||| Sbjct 310915 AAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGC 310974 Query 42131 ATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCT 42190 || | || |||||| ||||| || || | ||||| || || || || || | ||| Sbjct 310975 ATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCT 311034 Query 42191 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA-CT--GTCATGTATCCAC 42247 || || || ||||| || | | ||| || || || || || ||| || |||||| Sbjct 311035 TCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCAC 311094 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 || ||||| | ||||| | ||| | || || ||||| || ||||| || | | Sbjct 311095 CTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAA 311154 Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAA 42367 | | |||| || || || | || ||||| |||| || || | || || Sbjct 311155 AACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAG 311214 Query 42368 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACT 42427 ||||||||||| || || ||||||||||| |||||| |||| || | | || ||| Sbjct 311215 TGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACT 311274 Query 42428 TCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAAC 42487 || | | | || ||| | | ||||||||| ||||| || || |||||||||||| Sbjct 311275 TCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAAC 311334 Query 42488 GCCAATACATGTTTTATAAAATA------TTTTTCGTCCGGTGTTAATTTATTCCAATCA 42541 || | || | || ||||| ||||||| | || | || |||||||| Sbjct 311335 GCTAGCACCCGCGATAGGAAATAACGTTCATTTTCGTTC-ATGCGA--TTGTTCCAATCG 311391 Query 42542 TTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTA 42601 | ||||| || |||| ||| | ||| || | |||||||| || || || || |||| Sbjct 311392 TGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTA 311451 Query 42602 TACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 || | |||||| ||||| || | || ||||| | ||| ||||| Sbjct 311452 TAGGCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCT 311498 >seq1 Length=1828985 Score = 152 bits (168), Expect = 7e-32 Identities = 666/1043 (64%), Gaps = 22/1043 (2%) Strand=Plus/Minus Query 71973 TCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCAT 72032 ||| ||| |||| | ||| | | || | ||| || |||| || | || | || ||| Sbjct 253961 TCCTGGAGCTTCACTTGGAGAGAACAGAGTCCAATCGCCATTTTCCTGGACCCTTTGCAT 253902 Query 72033 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 72092 ||| | |||||||||||||||||| || | |||||||| | | ||||| || || Sbjct 253901 AAACAAGTCAGGAATCCAAAGAGCTGGGAACAAATCTCTGGCACGAATTTCCTCCTTACC 253842 Query 72093 TGTATTCTTTTTAAGA--TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 72150 || | |||| || || | || | | ||| || |||||||| || || | ||| Sbjct 253841 -GTGGT-TTTTGCGGATGTCAACAAAATCGAAAATGTCTGAATGCCATGGCTCAAGGTAC 253784 Query 72151 ATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 72210 | || | | | || || | |||||| || || ||||| | ||| | ||| ||||| || Sbjct 253783 AGAGCAAAAGCACCTGGTCTTTTGTTACCACCTTGATCAACGTAGCGAGCAGTGTTGTTG 253724 Query 72211 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 72270 | || | | ||| || |||| ||| ||||| | || || || |||| || || Sbjct 253723 AAGACACGAATCATGGGGATAAGACCGTTGGAAGTTCCGTTTGTACCGGCAATGTAAGAC 253664 Query 72271 CCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330 || | | ||||| ||| ||| | || || || || || |||||||||| | Sbjct 253663 CCGGTCGAGCGAATGTTGTGAATATGCAATCCGATACCGCCCGCAGTTTTAGAGATCATA 253604 Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390 || ||| ||| || || || || ||||| || || || || |||| | | | Sbjct 253603 GCACATTCTTTCAAAGTGTCGTAAATGCCGTCGATTGAGTCGTCTTTCATAGCCACCAAA 253544 Query 72391 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 72450 || || ||||| || | | ||| || ||||| || || |||||||| || ||| Sbjct 253543 AAGCACGACGACATCTGTGGGTGGGGAGTACCGGCATTGAACAACGTAGGAGACGCATGC 253484 Query 72451 GTAAACCATTTTTCAGACAGTAGATTGTACGTCT-CAATA-GCTGATTCTATATCCCATT 72508 || || | || |||| |||||||| || | ||||| ||| | || | || Sbjct 253483 GTGAAGTACTTGAGTGACATCAGATTGTAAGTTTCCAATACCCTG--GCGATGT--TGTT 253428 Query 72509 G--ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTT 72566 | ||| || || || || |||||||| | || ||| || |||||||| | | || Sbjct 253427 GCCATGAATACCGACAGCCACACGCATAATCAAATGTTGTGGTCTTTCTGCAACCTGTCC 253368 Query 72567 ATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 72626 || ||| | | | |||||| || | || || || |||||||||||||| ||| Sbjct 253367 GTTGATTCTGAGAAGGTAGGAGCGCTCAAGGGTCTTGAAGCCAAAATAGTTGTAATTAAA 253308 Query 72627 GTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCAT 72686 || || ||||| | ||| | || || || | ||||| | | | || ||||| Sbjct 253307 ATCGCGGTCGTAGACAATTGCAGAGTTCAGCTCGTCCTTGTTGTCCTGCACGATATC--- 253251 Query 72687 GGTGATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 72741 || | || | || || || || || || | ||||| || || || || || | | Sbjct 253250 -GT-ACACCTCCTGGGAGATCATGGGCGAGTGGATTCCATTCTTGGGGTTCACGTAATGG 253193 Query 72742 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 72801 || | || ||||| | ||| | || | |||| ||||| |||||||| | | Sbjct 253192 AAAAGTTCGCTTATCACCTGCGAAAACTGCTTGGTGGTTTGTTTGTGAAGATTTGAGATG 253133 Query 72802 GCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATT 72861 || ||||| ||||| | | | || || || ||||| || || | || || Sbjct 253132 GCAATTCTAGCGGCCAAAGTTGCGTAGTCAGGATGAACCGTGGTCATATACGCACAAGTT 253073 Query 72862 TCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACC 72921 || || |||||| ||||||| || |||||||| || || | || | || ||| | | Sbjct 253072 TCGGCAGCCAGATTGTCCAACTCCACCGTTGTCACACCTTCGTACACACCGGAGATGATC 253013 Query 72922 TTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTA 72981 | | ||||| | | ||| ||||| | || | || ||||||||||| Sbjct 253012 CGCTGTGTAATTTTCACCGCATCGATATGCTTAGGATCCAATCCATAACATAAACGCGAG 252953 Query 72982 ATACGAGACGTGATTTTATCAAA 73004 || || | |||||||||||||| Sbjct 252952 ATGCGTGCTGTGATTTTATCAAA 252930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138998658240