Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6 172 8e-38
>seq6
Length=784318
Score = 172 bits (190), Expect = 8e-38
Identities = 360/530 (68%), Gaps = 6/530 (1%)
Strand=Plus/Minus
Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054
||||| ||||||| ||| ||||| || ||| || || ||| || |||| || |||
Sbjct 311489 CTGTTCCCCATCAAGTACCATGAAATCTGGCAAGCCTATAAACGCGCCGAGGCGTCGTTT 311430
Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114
||||| | || || ||||||| |||||||| | |||||||| | | ||| |||
Sbjct 311429 TGGACCGCGGAGGAAATCGATCTATCCAAGGATATACACGATTGGAACAATCGCATGAAC 311370
Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
|||| ||| || | || |||||| | | || || ||||| | || ||||| ||
Sbjct 311369 GAAAATGAACGTTATTTCCTATCGCGGGTGCTAGCGTTTTTTGCAGCATCGGATGGGATA 311310
Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGC 125234
|||||||| |||||| || | |||||| || || | ||| || | ||
Sbjct 311309 GTCAACGAAAATCTGGTGGAAAATTTCTCTGCTGAAGTGCAAAGTCCGGAAGCCAAATGT 311250
Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294
||||||||||| ||||||||||| || ||| | ||||| || | ||||| |||||||
Sbjct 311249 TTTTACGGATTTCAAATCATGATGGAAAACATTCACTCCGAGACTTACTCGCTACTGATT 311190
Query 125295 GACATGTACATTCGCGATCCGCAACGTAA-ACACATGCTCTTTAACGCAATCGACACGGT 125353
|| | |||| || | || ||| | || | | | || || |||||||| || |
Sbjct 311189 GATACCTACA-TCAAGGACCCCAAAGAAAGTGAGTTTTTGTTCAATGCAATCGAAACTAT 311131
Query 125354 GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACG-ACAAG-TCT 125411
||| || ||||||||||||||| || ||||||| | |||| | ||| ||
Sbjct 311130 CCCGCAAATCAAAGAAAAGGCTCAATGGGCCATAAGGTGGATTCAAGACGAAGAAGCACT 311071
Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471
| | || || ||| ||||||| || || || || || || | || || || ||| |
Sbjct 311070 T--TTCGGTGAAAGATTGGTGGCTTTTGCAGCTGTTGAAGGTGTTTTTTTCTCAGGTTCT 311013
Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521
||||| ||||| || |||||||| ||| || | ||||| || ||||
Sbjct 311012 TTTGCAGCCATTTTCTGGCTCAAAAAGAAAGGTTTGATGCCGGGTTTGAC 310963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058977682240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |