Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq3 118 8e-22
seq1 114 9e-21
seq9 102 6e-17
>seq3
Length=955168
Score = 118 bits (130), Expect = 8e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||||| || || || | |||||| || || || |||||||| ||
Sbjct 273711 CCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 273770
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| ||||||| || || || ||||| | ||||| | |||||||| |||
Sbjct 273771 AAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGA 273830
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| ||| ||| ||| | || ||||| || | || ||
Sbjct 273831 ATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACC 273890
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|| | ||| || || ||||| || || || || || ||||||||||| ||
Sbjct 273891 TCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTT 273940
>seq1
Length=1828985
Score = 114 bits (126), Expect = 9e-21
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| | || ||| | || || || || || || || ||||| || ||||| ||
Sbjct 1304580 CCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGAC 1304521
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | ||||| |||||||| || || | ||||| | ||| ||||| ||||
Sbjct 1304520 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304461
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| |||||||| || | || || || || | ||| ||
Sbjct 1304460 ATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACT 1304401
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367
|| | |||||||| || || |||| ||| ||||||||||| ||||| |||
Sbjct 1304400 TCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTTT 1304350
>seq9
Length=718525
Score = 102 bits (112), Expect = 6e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || || | ||||| || || || |||||||| |||
Sbjct 427263 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 427322
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| ||||||| | || || |||||| | ||||| | || ||||| |||
Sbjct 427323 AAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGA 427382
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || || ||||| ||| ||| ||| ||| | || ||||| || | ||| ||
Sbjct 427383 ATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACT 427442
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355
|| || || ||||| ||||| |||| || || ||||||
Sbjct 427443 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAAA 427481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362179094062584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |