Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq6 228 7e-55
>seq6
Length=784318
Score = 228 bits (252), Expect = 7e-55
Identities = 499/733 (68%), Gaps = 22/733 (3%)
Strand=Plus/Plus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || || |||||||||||| ||||| || || || || ||| |||||| |||
Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677
Query 12920 TCCATAAAATCGAAAGGATTTTTCGA-ACA--ATAGTATTTTTTACACCCTAATTCTAGT 12976
||||| ||||| |||||||| || || ||| | || | | || || | |
Sbjct 310678 TCCATGAAATCAAAAGGATTG---GATACCTTATAAAACTTGTCATTACCCAAAGCCACC 310734
Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036
|||||||| ||||||||||| || | || || ||||| ||||| |||||| || |
Sbjct 310735 AACAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGC 310794
Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096
||| ||| |||| || ||| | ||| | | || || ||||| || || |||
Sbjct 310795 AATGATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATG 310854
Query 13097 ATGTCTCTTATTACGTTCTCTAA---TGGAGGATTTGATAGATGCTTAAACATCATACAT 13153
|| |||| ||| | | | ||| |||| | || ||||| || |||
Sbjct 310855 AT---TCTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACAC 310911
Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213
|||||||| || || ||||||||||| | || ||||| || |||||||| | ||||
Sbjct 310912 GCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCC 310971
Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273
||||| | ||| ||||| | ||| || || || ||||| ||||| || ||||| |
Sbjct 310972 GGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACA 311031
Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACC-ATACGTACTATTTTTACTCTCTAT 13332
|||||||| |||||||| || | ||| |||||||| | | || || || || | ||
Sbjct 311032 CCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCT-TGAAT 311090
Query 13333 CCACTTTCTGGCCCAGTTTGCTTTTTGTTTAA--CGCAGTTCATATTTTCTATTGCGTTA 13390
|||| || ||||||| | || |||| ||| | || | ||| |||| ||||| ||
Sbjct 311091 CCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGG--GATAGTTTCGATTGCATTG 311148
Query 13391 AATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTA-TACAT 13449
|| ||| | | |||| || ||| || || ||||| |||| | ||| | || |
Sbjct 311149 AACAAAAACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGT-AGCGAGTAAGT 311207
Query 13450 TTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATAC 13509
|| || ||||| ||||||||| ||||| || || ||||||||| | || || |
Sbjct 311208 CTCGGAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACT 311267
Query 13510 CTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568
|| ||||| | || |||| |||| | | |||||||| |||||||| || || |
Sbjct 311268 TTGCACTTCAGCAGAGAAAT-TTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTG 311326
Query 13569 CaaaaaaaGCAAG 13581
||||||| || ||
Sbjct 311327 CAAAAAACGCTAG 311339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982273937648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |