Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq6 228 7e-55 >seq6 Length=784318 Score = 228 bits (252), Expect = 7e-55 Identities = 499/733 (68%), Gaps = 22/733 (3%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || || |||||||||||| ||||| || || || || ||| |||||| ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 12920 TCCATAAAATCGAAAGGATTTTTCGA-ACA--ATAGTATTTTTTACACCCTAATTCTAGT 12976 ||||| ||||| |||||||| || || ||| | || | | || || | | Sbjct 310678 TCCATGAAATCAAAAGGATTG---GATACCTTATAAAACTTGTCATTACCCAAAGCCACC 310734 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 |||||||| ||||||||||| || | || || ||||| ||||| |||||| || | Sbjct 310735 AACAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGC 310794 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 ||| ||| |||| || ||| | ||| | | || || ||||| || || ||| Sbjct 310795 AATGATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATG 310854 Query 13097 ATGTCTCTTATTACGTTCTCTAA---TGGAGGATTTGATAGATGCTTAAACATCATACAT 13153 || |||| ||| | | | ||| |||| | || ||||| || ||| Sbjct 310855 AT---TCTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACAC 310911 Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213 |||||||| || || ||||||||||| | || ||||| || |||||||| | |||| Sbjct 310912 GCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCC 310971 Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273 ||||| | ||| ||||| | ||| || || || ||||| ||||| || ||||| | Sbjct 310972 GGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACA 311031 Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACC-ATACGTACTATTTTTACTCTCTAT 13332 |||||||| |||||||| || | ||| |||||||| | | || || || || | || Sbjct 311032 CCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCT-TGAAT 311090 Query 13333 CCACTTTCTGGCCCAGTTTGCTTTTTGTTTAA--CGCAGTTCATATTTTCTATTGCGTTA 13390 |||| || ||||||| | || |||| ||| | || | ||| |||| ||||| || Sbjct 311091 CCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGG--GATAGTTTCGATTGCATTG 311148 Query 13391 AATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTA-TACAT 13449 || ||| | | |||| || ||| || || ||||| |||| | ||| | || | Sbjct 311149 AACAAAAACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGT-AGCGAGTAAGT 311207 Query 13450 TTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATAC 13509 || || ||||| ||||||||| ||||| || || ||||||||| | || || | Sbjct 311208 CTCGGAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACT 311267 Query 13510 CTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568 || ||||| | || |||| |||| | | |||||||| |||||||| || || | Sbjct 311268 TTGCACTTCAGCAGAGAAAT-TTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTG 311326 Query 13569 CaaaaaaaGCAAG 13581 ||||||| || || Sbjct 311327 CAAAAAACGCTAG 311339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982273937648