Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq6 147 5e-30
seq3 141 2e-28
seq1 134 3e-26
seq9 111 4e-19
>seq6
Length=784318
Score = 147 bits (162), Expect = 5e-30
Identities = 371/557 (67%), Gaps = 24/557 (4%)
Strand=Plus/Minus
Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804
|| |||| |||| || || |||||||| | || ||| | ||||| || | || ||
Sbjct 311453 TATAAACGCGCCGAGGCGTCGTTTTGGACCGCGGAGGAAATCGATCTATCCAAGGATATA 311394
Query 268805 ATAGATTGGAAAAATTTAA--AACCAGAAGAAAGAAGATTTATATCTTATA-----TTCT 268857
|||||||| ||| | ||| ||| || ||| || || || ||| | ||
Sbjct 311393 CACGATTGGAACAATCGCATGAAC--GAA-AATGAACGTT-ATTTCCTATCGCGGGTGCT 311338
Query 268858 TGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCA 268917
||||||||||||| ||||| || || ||||||||||| || || || |||| |
Sbjct 311337 AGCGTTTTTTGCAGCATCGGATGGGATAGTCAACGAAAATCTGGTGGAAAATTTCTCTGC 311278
Query 268918 AGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATAT 268977
|| || || | ||| ||||||| ||||||||||||||| || || || ||||| ||
Sbjct 311277 TGAAGTGCAAAGTCCGGAAGCCAAATGTTTTTACGGATTTCAAATCATGATGGAAAACAT 311218
Query 268978 TCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAA 269037
||| || |||| ||| ||| | || ||||| || || | || ||| || ||
Sbjct 311217 TCACTCCGAGACTTACTCGCTACTGATTGATACCTACATCAAGGACCCCAAAGA----AA 311162
Query 269038 AAGACTATTTTCTTCTATG-----AGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGG 269092
|| | |||| ||| ||| |||||| | | | |||| || |||||
Sbjct 311161 GTGAGT-TTTTGTTCAATGCAATCGAAACTATCCCGCAAATCAAAGAAAAGGCTCAATGG 311103
Query 269093 GCTCTGAAATGGAT---AAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCC 269149
|| | | ||||| | |||| || | || ||| ||||| || || ||||||||
Sbjct 311102 GCCATAAGGTGGATTCAAGACGAAGAAGCACTTTTCGGTGAAAGATTGGTGGCTTTTGCA 311043
Query 269150 GCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGA 269209
||||| |||||| | || || || || |||||||| || || || ||| | || || | |
Sbjct 311042 GCTGTTGAAGGTGTTTTTTTCTCAGGTTCTTTTGCAGCCATTTTCTGGCTCAAAAAGAAA 310983
Query 269210 GGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACAC 269269
|| | ||||| || || || || || || || | || |||| || |||||||||||
Sbjct 310982 GGTTTGATGCCGGGTTTGACATTTTCCAATGAGCTCATTTGCAGAGATGAAGGTTTACAT 310923
Query 269270 TGCGACTTCGCTTGTTT 269286
|| || || |||||
Sbjct 310922 ACGGATTTTGCGTGTTT 310906
>seq3
Length=955168
Score = 141 bits (156), Expect = 2e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| | || || || | || || || ||||| ||||| || || ||||| ||
Sbjct 273711 CCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 273770
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||||| |||||||| | || || |||||||| || | |||||||| ||||||||
Sbjct 273771 AAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGA 273830
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || ||||||||||| | || ||||| || | ||| || || || |||
Sbjct 273831 ATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACC 273890
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| || || || |||||||| || || || || || || || ||||| |||
Sbjct 273891 TCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTTG 273941
>seq1
Length=1828985
Score = 134 bits (148), Expect = 3e-26
Identities = 152/201 (76%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || ||||| |||||||| | |||||| || ||||| | |||||||||
Sbjct 1304550 GTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCT 1304491
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | || || || || || || || ||||| || || |||||||| ||| ||
Sbjct 1304490 GCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTT-GCTCTT 1304432
Query 104483 -ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | || || || ||| || || || ||||| ||||| ||||| | ||
Sbjct 1304431 CACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGTCTTTCCAGTCAAAGT 1304372
Query 104542 TTTTACAAATATCTGCATTTT 104562
|||||||| |||||||||||
Sbjct 1304371 CTTTACAAAAATCTGCATTTT 1304351
Score = 120 bits (132), Expect = 7e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || || || |||||||| | |||||| || ||||| | |||||||||
Sbjct 1304778 GTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCC 1304719
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|||||||| | || || || || || || || || || |||||||||||| ||||| ||
Sbjct 1304718 GCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTGAATC-TTGCTCTT 1304660
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | || || || || || || || ||||| ||||| || || | ||
Sbjct 1304659 CACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTTTCCGGTCAAGGT 1304600
Query 104542 TTTTACAAATATCTGCAT 104559
||| ||||| ||||||||
Sbjct 1304599 TTTCACAAAAATCTGCAT 1304582
>seq9
Length=718525
Score = 111 bits (122), Expect = 4e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || ||||| ||||| || || ||||| || | ||||| |||||||| || ||
Sbjct 427287 TGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCAAGCTGC 427346
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||| || || | ||||| || |||||||| || || || || || ||||||||
Sbjct 427347 TTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGAATCTTG 427406
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | ||| || || ||| || || | || || |||||||||||
Sbjct 427407 GACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 427466
Query 104537 AGTGTTTTTACAAA 104550
| || || |||||
Sbjct 427467 AAGGTCTTGACAAA 427480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398045944992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |