Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq6 147 5e-30 seq3 141 2e-28 seq1 134 3e-26 seq9 111 4e-19 >seq6 Length=784318 Score = 147 bits (162), Expect = 5e-30 Identities = 371/557 (67%), Gaps = 24/557 (4%) Strand=Plus/Minus Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804 || |||| |||| || || |||||||| | || ||| | ||||| || | || || Sbjct 311453 TATAAACGCGCCGAGGCGTCGTTTTGGACCGCGGAGGAAATCGATCTATCCAAGGATATA 311394 Query 268805 ATAGATTGGAAAAATTTAA--AACCAGAAGAAAGAAGATTTATATCTTATA-----TTCT 268857 |||||||| ||| | ||| ||| || ||| || || || ||| | || Sbjct 311393 CACGATTGGAACAATCGCATGAAC--GAA-AATGAACGTT-ATTTCCTATCGCGGGTGCT 311338 Query 268858 TGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCA 268917 ||||||||||||| ||||| || || ||||||||||| || || || |||| | Sbjct 311337 AGCGTTTTTTGCAGCATCGGATGGGATAGTCAACGAAAATCTGGTGGAAAATTTCTCTGC 311278 Query 268918 AGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATAT 268977 || || || | ||| ||||||| ||||||||||||||| || || || ||||| || Sbjct 311277 TGAAGTGCAAAGTCCGGAAGCCAAATGTTTTTACGGATTTCAAATCATGATGGAAAACAT 311218 Query 268978 TCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAA 269037 ||| || |||| ||| ||| | || ||||| || || | || ||| || || Sbjct 311217 TCACTCCGAGACTTACTCGCTACTGATTGATACCTACATCAAGGACCCCAAAGA----AA 311162 Query 269038 AAGACTATTTTCTTCTATG-----AGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGG 269092 || | |||| ||| ||| |||||| | | | |||| || ||||| Sbjct 311161 GTGAGT-TTTTGTTCAATGCAATCGAAACTATCCCGCAAATCAAAGAAAAGGCTCAATGG 311103 Query 269093 GCTCTGAAATGGAT---AAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCC 269149 || | | ||||| | |||| || | || ||| ||||| || || |||||||| Sbjct 311102 GCCATAAGGTGGATTCAAGACGAAGAAGCACTTTTCGGTGAAAGATTGGTGGCTTTTGCA 311043 Query 269150 GCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGA 269209 ||||| |||||| | || || || || |||||||| || || || ||| | || || | | Sbjct 311042 GCTGTTGAAGGTGTTTTTTTCTCAGGTTCTTTTGCAGCCATTTTCTGGCTCAAAAAGAAA 310983 Query 269210 GGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACAC 269269 || | ||||| || || || || || || || | || |||| || ||||||||||| Sbjct 310982 GGTTTGATGCCGGGTTTGACATTTTCCAATGAGCTCATTTGCAGAGATGAAGGTTTACAT 310923 Query 269270 TGCGACTTCGCTTGTTT 269286 || || || ||||| Sbjct 310922 ACGGATTTTGCGTGTTT 310906 >seq3 Length=955168 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| | || || || | || || || ||||| ||||| || || ||||| || Sbjct 273711 CCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 273770 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||||| |||||||| | || || |||||||| || | |||||||| |||||||| Sbjct 273771 AAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGA 273830 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || ||||||||||| | || ||||| || | ||| || || || ||| Sbjct 273831 ATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACC 273890 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || || |||||||| || || || || || || || ||||| ||| Sbjct 273891 TCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTTG 273941 >seq1 Length=1828985 Score = 134 bits (148), Expect = 3e-26 Identities = 152/201 (76%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || || ||||| |||||||| | |||||| || ||||| | ||||||||| Sbjct 1304550 GTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCT 1304491 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | || || || || || || || ||||| || || |||||||| ||| || Sbjct 1304490 GCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTT-GCTCTT 1304432 Query 104483 -ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || || ||| || || || ||||| ||||| ||||| | || Sbjct 1304431 CACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGTCTTTCCAGTCAAAGT 1304372 Query 104542 TTTTACAAATATCTGCATTTT 104562 |||||||| ||||||||||| Sbjct 1304371 CTTTACAAAAATCTGCATTTT 1304351 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || || || || |||||||| | |||||| || ||||| | ||||||||| Sbjct 1304778 GTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCC 1304719 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 |||||||| | || || || || || || || || || |||||||||||| ||||| || Sbjct 1304718 GCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTGAATC-TTGCTCTT 1304660 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || || || || || || ||||| ||||| || || | || Sbjct 1304659 CACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTTTCCGGTCAAGGT 1304600 Query 104542 TTTTACAAATATCTGCAT 104559 ||| ||||| |||||||| Sbjct 1304599 TTTCACAAAAATCTGCAT 1304582 >seq9 Length=718525 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| ||||| || || ||||| || | ||||| |||||||| || || Sbjct 427287 TGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCAAGCTGC 427346 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||| || || | ||||| || |||||||| || || || || || |||||||| Sbjct 427347 TTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGAATCTTG 427406 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | ||| || || ||| || || | || || ||||||||||| Sbjct 427407 GACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 427466 Query 104537 AGTGTTTTTACAAA 104550 | || || ||||| Sbjct 427467 AAGGTCTTGACAAA 427480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398045944992