Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 2e-25
seq3 125 6e-24
seq9 118 1e-21
>seq1
Length=1828985
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || | ||||| | ||||||||| | ||| ||||||||||| | ||| || || |
Sbjct 1304808 CCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGAC 1304749
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || ||| |||| |||||||| |||| || ||||||||||| ||||| |||
Sbjct 1304748 AAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304689
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| || || || | ||| || ||| ||| | | | |||||||| || ||
Sbjct 1304688 ATACCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACT 1304629
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || ||||| ||||| || | ||||||||||| ||||||||
Sbjct 1304628 TCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||| ||||||||||| | || || || || ||| || ||| ||
Sbjct 1304563 CACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304504
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|| |||||||| |||| || ||||||||||| ||||| ||||||||||| ||||| |
Sbjct 1304503 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTG 1304444
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||| ||| | | | |||||| | || || || | || ||||| ||
Sbjct 1304443 AATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGTCTT 1304384
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||||| | ||| || ||||| ||||||||
Sbjct 1304383 TCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||| ||||||||||| | || || || || ||| || ||| ||
Sbjct 1305019 CACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304960
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|| |||||||| |||| || ||||||||||| ||||| |||||||| || ||||| |
Sbjct 1304959 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCTTG 1304900
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||| ||| | | | |||||||| || || || | |||||||| ||
Sbjct 1304899 AATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCTT 1304840
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || | |||||||| || ||||||||
Sbjct 1304839 TCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
>seq3
Length=955168
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| | |||||||||||| || |||||||| || | ||| || || |
Sbjct 273711 CCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 273770
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || || |||| ||| || || ||||||| ||||| || || || ||||||
Sbjct 273771 AAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGA 273830
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| || | |||||| | ||| ||||||| || ||
Sbjct 273831 ATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACC 273890
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| || || || || || || || || || || |||||
Sbjct 273891 TCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCAT 273937
>seq9
Length=718525
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||||||||| |||||||| || | ||| || ||| |
Sbjct 427263 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 427322
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || || || || ||||| || || | ||||| ||||| ||||| || ||||||
Sbjct 427323 AAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGA 427382
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| || ||||| | ||| || | |||||| | | | ||||| | || ||
Sbjct 427383 ATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACT 427442
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|| | |||||||| || ||||| | || || |||||
Sbjct 427443 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291065512640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |