Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq9 105 1e-18 seq3 82.4 1e-11 >seq9 Length=718525 Score = 105 bits (116), Expect = 1e-18 Identities = 171/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| |||| |||| ||||||||||| ||||| ||||| ||||| Sbjct 566115 GCCAAGCGTCACAGAAAGAT-TCTTAGAGACAACATCCAAGGTATCACTAAGCCTGCTAT 566057 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || || | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 566056 CAGAAGACTTGCCAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 565997 Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | ||| | || ||| ||| | || | |||||| || ||| || ||| || | Sbjct 565996 CAGAGCTGTGCTCAA-ATCGTTCTTGGAGTCGGTTATCAGAGACGCTGTCACCTACACTG 565938 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | |||||||| | ||||| ||||| || |||| | || || || |||| | |||| Sbjct 565937 AACACGCTAAGAGAAAGACCGTCACTTCGCTGGACGTTGTTTACGCTCTGAAGAGACAAG 565878 Query 16671 G 16671 | Sbjct 565877 G 565877 >seq3 Length=955168 Score = 82.4 bits (90), Expect = 1e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||| ||||||||||| ||||||||||| || || Sbjct 99861 GCCAAGCGTCACAGAAAGAT-TCTAAGAGACAACATCCAAGGTATCACCAAGCCTGCCAT 99919 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 | | | ||||| | | ||||| ||||||||| | ||||| ||| |||| ||||| Sbjct 99920 CAGAAGACTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGA 99976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075178056632