Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq6 235 7e-57 seq1 161 1e-34 >seq6 Length=784318 Score = 235 bits (260), Expect = 7e-57 Identities = 585/884 (66%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || || | ||||||||||||||| || || || | | || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||||||||| ||||||| || ||||||| || | | ||||| | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 |||||||| || || ||||| | |||| ||||||| || ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 || || || || | ||| | | || ||||| ||||| ||||| || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857 Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312 | |||| ||| | | | || || || ||| ||||| |||||| || ||| Sbjct 310858 CTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAAA 310917 Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372 || || | ||| || ||||| | ||| || || |||||||| || | || ||||| Sbjct 310918 TCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCATC 310977 Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432 | || |||||| ||||| || |||| || || || || || || || | ||||| Sbjct 310978 AAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTCA 311037 Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG-CT--GTCATGTATCCACTTT 33489 || || ||||| || | | ||| || || || || || ||| || |||||| || Sbjct 311038 ACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCTT 311097 Query 33490 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33549 ||||| | ||||| | ||| | || || ||||| || ||||| || | | | Sbjct 311098 ATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAAC 311157 Query 33550 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33609 | |||| || || || | || ||||| |||| || || | || || ||| Sbjct 311158 TCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTGA 311217 Query 33610 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 33669 |||||||| || || ||||||||||| |||||| | || || | | | || ||||| Sbjct 311218 ATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTCA 311277 Query 33670 GTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 33729 | | | || |||| ||| |||||| || ||||| || || |||||||||||||| Sbjct 311278 GCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGCT 311337 Query 33730 AATACATGTTTTATAAAATA------TTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 33783 | || | || ||||| ||||||| | || | || |||||||| | Sbjct 311338 AGCACCCGCGATAGGAAATAACGTTCATTTTCGT-TCATG--CGATTGTTCCAATCGTGT 311394 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843 ||||| || |||| ||| | ||| ||| | |||||||| || ||||| || |||||| Sbjct 311395 ATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAG 311454 Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 | |||||| |||| || | ||| ||||| | ||| ||||| Sbjct 311455 GCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCT 311498 >seq1 Length=1828985 Score = 161 bits (178), Expect = 1e-34 Identities = 622/967 (64%), Gaps = 20/967 (2%) Strand=Plus/Minus Query 63137 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 63196 ||| ||||| |||| |||| | | | ||| ||| |||| ||| | | || | Sbjct 253991 TTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGT 253932 Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63256 ||| || || | |||| || | || |||||| | |||||||||||||||||| || Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCC 63314 | |||||||| | | |||||| || || || | |||| ||| | | || | Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814 Query 63315 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63374 | ||| || |||||||| || || | ||| | || | | | || || | |||||| || Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754 Query 63375 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63434 || ||||| | ||| | ||| ||||| || | || | | ||| || |||| |||||| Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694 Query 63435 GATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63494 || | || || ||||||| || || || | | ||||| || ||| | Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || || || || || |||||||||| | || ||| ||| || ||||| || || || Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || || || || |||| | | ||| || ||||| || | | ||| Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 || ||||| || || |||||||| || ||||| || | || || | |||||||| Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454 Query 63675 GTCTC-AATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63731 || || |||| | | | || | ||| |||||| || || || |||||||| | | Sbjct 253453 GTTTCCAATACCCTGG-CGATGTTG--TTGCCATGAATACCGACAGCCACACGCATAATC 253397 Query 63732 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63791 | || || |||||||| | | || ||| ||| | | | |||||| || | Sbjct 253396 AAATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAGG 253337 Query 63792 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63851 || || || |||||||||||||| ||| || || ||||| | ||| | ||||| || Sbjct 253336 GTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAGC 253277 Query 63852 TTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-----GAAATAATCGGAGAAT 63906 | ||||| | | | || ||||| || | || | || || || || || | Sbjct 253276 TCGTCCTTGTTGTCCTGCACGATATC----GT-ACACCTCCTGGGAGATCATGGGCGAGT 253222 Query 63907 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63966 | | ||||| || || || || || | ||| | || ||||| | ||| | | Sbjct 253221 GGATTCCATTCTTGGGGTTCACGTAATGGAAAAGTTCGCTTATCACCTGCGAAAACTGCT 253162 Query 63967 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64026 | | |||| ||||| |||||||| | ||| ||||| ||||| | | | || || || | Sbjct 253161 TGGTGGTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCAG 253102 Query 64027 GATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTG 64086 |||| || || | || ||||||| |||||| ||||||| || ||||||| Sbjct 253101 GATGAACCGTGGTCATATACGCACAAGTTTCGGCAGCCAGATTGTCCAACTCCACCGTTG 253042 Query 64087 TTACTCC 64093 | || || Sbjct 253041 TCACACC 253035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947013115840