Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 187 6e-42 seq6 143 7e-29 >seq1 Length=1828985 Score = 187 bits (206), Expect = 6e-42 Identities = 550/831 (66%), Gaps = 25/831 (3%) Strand=Plus/Plus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTG 363445 |||||| || | ||||| | ||| |||||||| |||| | ||||| || | ||| Sbjct 253320 TATTTT-GGCTTCAAGACCCTTGAGCGCTCCTACCT-TCTCAGAATCAACGGACAGGTTG 253377 Query 363446 TTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTG 363505 ||| | || || ||| || | |||||||| ||| | ||||| ||| || | | | Sbjct 253378 CAGAAAGACCACAACATTTGATTATGCGTGTGGCTGTCGGTATTCATGGCAACAACATCG 253437 Query 363506 ATGCCGCG-ATTG-AAACATATAAGCTTCTAAGTG-CTCGTGTA-TTCACGCACGCCACG 363561 | | | |||| |||| || || || | || ||| ||| |||||||| || | Sbjct 253438 C--CAGGGTATTGGAAACTTACAATCTGAT--GTCACTCAAGTACTTCACGCATGCGTCT 253493 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 || || ||| |||||| || |||| | ||||||||||| || |||||| | | Sbjct 253494 CCTACGTTGTTCAATGCCGGTACTCCCCACCCACAGATGTCGTCGTGCTTTTTGGTGGCT 253553 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| ||||| || ||||| || || | ||||| | || | |||||| | || || Sbjct 253554 ATGAAAGACGACTCAATCGACGGCATTTACGACACTTTGAAAGAATGTGCTATGATCTCT 253613 Query 363682 AAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCACAGAACAG---TT 363736 || | ||| ||||| || || || || || ||||| |||| | || | | || Sbjct 253614 AAAACTGCGGGCGGTATCGGATTGCAT--ATTCACAACATTCGCTC---GACCGGGTCTT 253668 Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||||| ||| ||| ||| || || || || | |||||| ||||||| || ||| Sbjct 253669 ACATTGCCGGTACAAACGGAACTTCCAACGGTCTTATCCCCATGATTCGTGTCTTCAACA 253728 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | ||||| | ||||| || || ||||| | |||| | ||| || |||||| |||| Sbjct 253729 ACACTGCTCGCTACGTTGATCAAGGTGGTAACAAAAGACC--AGGTGCTTTTGCTCTGTA 253786 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 || ||||| ||| | || ||||| || ||| |||| |||| |||||| || || Sbjct 253787 CCTTGAGCCATGGCATTCAGACATTTTCGATTTTGTTGACATCCGCAAAAACCACGGTAA 253846 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 |||||| | ||||| | ||| ||||| || |||||| || ||||| |||||| | Sbjct 253847 GGAGGAAATTCGTGCCAGAGATTTGTTCCCAGCTCTTTGGATTCCTGACTTGTTTATGCA 253906 Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 | || ||| | | ||||| | || || | ||| ||| |||||| ||| | Sbjct 253907 AAGGGTCCAGGAAAATGGCGATTGGACTCTGTTCTCTCCAAGTGAAGCTCCAGGACTTGC 253966 Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094 || || | || | || | || ||||| ||||| || | ||| || | Sbjct 253967 TGACGTTTATGGAGCAGAGTTTGAAGCTCTTTACGAGCGCTACGTTCAGGAAGGTCGTGG 254026 Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 | | ||||| || || || ||| | |||| ||| || | || | || | ||||| Sbjct 254027 TAGAAAGACCATCAAGGCTCAAAAGTTGTGGTATGCTATTCTAGAGGCCCAAACAGAGAC 254086 Query 364155 AGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 || ||||| | ||| ||||||||||| | |||||||| || || ||||| Sbjct 254087 TGGTACACCTTTCATGCTGTACAAAGATGCCTGCAACCGTAAATCGAACCA 254137 >seq6 Length=784318 Score = 143 bits (158), Expect = 7e-29 Identities = 308/456 (68%), Gaps = 17/456 (4%) Strand=Plus/Minus Query 22501 GCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTa 22560 || ||||| | |||||||| |||| || || || | ||| || || || ||||| Sbjct 311051 GCTTTTGCAGCTGTTGAAGGTGTTTTTTTCTCAGGTTCTTTTGCAGCCATTTTCTGGCTC 310992 Query 22561 aaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAG 22620 ||||| | | ||||||||| | || ||||| |||||| | ||| || ||||||| Sbjct 310991 AAAAAGAAAGGTTTGATGCCGGGTTTGACATTTTCCAATGAGCTCATTTGCAGAGATGAA 310932 Query 22621 GGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCA 22680 ||| | ||||| |||||||||||| |||| | | | | || | | |||| | || Sbjct 310931 GGTTTACATACGGATTTTGCGTGTTTGCTGTTT--GCA-CACTTGAAAAATAAGC---CA 310878 Query 22681 TATGAAACTGTACTTGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTTATT 22737 || || | |||| | | |||||| | || |||||| |||| | | | | || Sbjct 310877 AATCCAAAAATCGTTGAAAGAATCATTACAGAGGCGGTTGAAATTGAGCAGCGTTATTTT 310818 Query 22738 TGCGAGGCGTTACCAGTAAGTCTCATTGGT----ATCAATGCCGAATCAATGAGTACATA 22793 | || || | || ||| |||||| | || || ||||| | |||| | ||| Sbjct 310817 AGAGATGCCCTGCCCGTA----TCATTGCTGGGCATGAACGCCGATTTGATGAATCAATA 310762 Query 22794 TATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGT 22853 | | |||||||||| ||| | | || | | | ||| ||| ||| |||||| || Sbjct 310761 TGTGGAATTTGTTGCTGATAGATTGTTGGTGGCTTTGGGTAATGACAAGTTTTATAAGGT 310702 Query 22854 CGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGA 22913 ||||| ||||| | |||||| ||||| || | || ||||||||||| ||||| Sbjct 310701 ATCCAATCCTTTTGATTTCATGGAAAACATTTCGCTAGCTGGTAAGACCAATTTTTTCGA 310642 Query 22914 AAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTAT 22949 |||||||||| || |||||||| || |||||||| Sbjct 310641 AAAAAGAGTTTCGGATTACCAAAAGGCTGGTGTTAT 310606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353199218768