Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 7e-23
seq3 89.7 4e-13
>seq1
Length=1828985
Score = 122 bits (134), Expect = 7e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|| || |||| || || || || |||||||| ||||||||||| | || ||| || |
Sbjct 1304796 CTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 1304737
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| ||||||||||| |||||| |||| | | || ||||| || | ||||| ||
Sbjct 1304736 TCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTA 1304677
Query 16841 TCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGAT 16899
|| ||| ||||| |||||| | | | | |||||| | |||| ||||| || ||
Sbjct 1304676 TCCTGAATCTTGCT-CTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAAT 1304618
Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||| |||||||||| ||||| ||||||||||||||
Sbjct 1304617 GGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || ||||| || || |||| || || || || ||||||||||| |||||||| | |
Sbjct 1305036 CCGCCCCGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGAC 1304977
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || | || ||||||||||| || ||| |||| | | || ||||| ||
Sbjct 1304976 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304917
Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||||| ||||| ||| ||||| |||||| | | | | |||||| | |||
Sbjct 1304916 ATACCCTCCTTGTCTTGAATCTTGCT-CTTCACGTTGTCAATAGTGTCAGAAGATTCCAC 1304858
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||||| |||||||||| ||||| || |||||||||||
Sbjct 1304857 CTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || || || |||| || || || || |||||||| || |||||||| | |
Sbjct 1304580 CCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGAC 1304521
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || | || ||||||||||| || ||| |||| | | || ||||| ||
Sbjct 1304520 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304461
Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| || || ||||| ||| ||||| |||||| | | | | |||||| | |||
Sbjct 1304460 ATACCTTCCTTGTCTTGAATCTTGCT-CTTCACGTTGTCAATAGTGTCCGAAGATTCCAC 1304402
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
||||| || ||||| ||||| |||| || || |||||||||||||||||
Sbjct 1304401 TTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351
>seq3
Length=955168
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|| || |||| |||| ||||| ||||| || ||||||||||| | || ||| || ||
Sbjct 273723 CTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCG 273782
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| ||||| || || || ||| | || | | ||||||||| ||| | || || |||
Sbjct 273783 TCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTG 273842
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||| | ||| || | | | | ||||| | |||| || | ||||||
Sbjct 273843 TCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATC 273902
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || ||||| || || ||||| ||||| ||||| |||
Sbjct 273903 GTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTTG 273941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087881511760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |