Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq6 233 2e-56 seq1 174 2e-38 >seq6 Length=784318 Score = 233 bits (258), Expect = 2e-56 Identities = 598/905 (66%), Gaps = 18/905 (2%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| || || | ||||||||||||||| || ||||| ||| || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||||||||| || ||||||| || ||||||| || | | ||||| | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 |||||||| || |||||||| | |||| ||||||| || ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609 || || || || | ||| | | || ||||| ||||| ||||| || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGAT- 310856 Query 32610 GATCTT---ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 32666 |||| || ||| | | | || || || ||| ||||| |||||| || Sbjct 310857 --TCTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCA 310914 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 ||||| |||| ||| || ||||| | ||| | || |||||||| || | || ||| Sbjct 310915 AAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGC 310974 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 32786 || | || |||||| ||||| || |||| ||||| || || || || |||| ||| Sbjct 310975 ATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCT 311034 Query 32787 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG-CT--GTCATGTATCCAC 32843 || || || ||||| || | | ||| || || || || || ||| || |||||| Sbjct 311035 TCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCAC 311094 Query 32844 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 32903 || ||||| | ||||| | ||| | || || || || || ||||| || | | Sbjct 311095 CTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAA 311154 Query 32904 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 32963 | | |||| || || || | || |||||||||| || || | || || Sbjct 311155 AACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAG 311214 Query 32964 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACT 33023 ||||||||||| || |||||||||||||| || ||| | || || | | | || ||| Sbjct 311215 TGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACT 311274 Query 33024 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33083 || | | | || ||| | | |||||| || ||||| || || |||||||||||| Sbjct 311275 TCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAAC 311334 Query 33084 GCCAATACATGTTTTATAAAATA------TTTTTCGTCTGGTGTTAGTTTATTCCAATCA 33137 || | || | || ||||| ||||||| | || | || |||||||| Sbjct 311335 GCTAGCACCCGCGATAGGAAATAACGTTCATTTTCGT-TCATG--CGATTGTTCCAATCG 311391 Query 33138 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33197 | ||||| || |||| ||| | ||| ||| | |||||||| || ||||| || |||| Sbjct 311392 TGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTA 311451 Query 33198 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTT 33257 || | |||||| ||||| || | || || || | ||| ||||| | ||||| | Sbjct 311452 TAGGCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCTGCGTTTATTTTCT 311511 Query 33258 GCAAG 33262 || || Sbjct 311512 GCCAG 311516 >seq1 Length=1828985 Score = 174 bits (192), Expect = 2e-38 Identities = 690/1077 (64%), Gaps = 18/1077 (2%) Strand=Plus/Minus Query 62992 TTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGA 63051 ||| ||||| |||| |||| | | ||||| ||| |||| ||| | | || | Sbjct 253991 TTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGT 253932 Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 ||| || || | |||| || | || |||||| | |||||||||||||||||| || Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCC 63169 | |||||||| | | |||||| || || || | |||| ||| | | || | Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814 Query 63170 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63229 | ||| || |||||||| || || | ||| | || | | | || || | |||||| || Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754 Query 63230 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 63289 || ||||| | ||| | ||| ||||| || | || | | ||| || |||| ||| ||| Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694 Query 63290 GATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63349 || || || || || || | || || || | | ||||| || ||| | Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634 Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409 || || || || || |||||||||| | || ||| ||| || || || || ||||| Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574 Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63469 || || || || |||| | | ||| || ||||| || | | ||| Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 || ||||| || || |||||||| || || || || | || || | |||||||| Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454 Query 63530 GTCTC-AATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63586 || || |||| | | | || | ||| |||||| || || || |||||||| | | Sbjct 253453 GTTTCCAATACCCTGG-CGATGTTG--TTGCCATGAATACCGACAGCCACACGCATAATC 253397 Query 63587 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63646 | || || |||||||| | | || ||| ||| | | | |||||| || | Sbjct 253396 AAATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAGG 253337 Query 63647 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63706 || || || |||||||||||||| ||| || || ||||| | ||| | ||||| || Sbjct 253336 GTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAGC 253277 Query 63707 TTATCCTTATATTTGTTAACTACATCCATGGTAATACT----TGAAATAATAGGAAAATG 63762 | ||||| | | | || | ||| ||| || || || || || | || Sbjct 253276 TCGTCCTTGTTGTCCTGCACGATATC----GTACACCTCCTGGGAGATCATGGGCGAGTG 253221 Query 63763 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63822 | ||||| || || || || || | ||| | || ||||| | ||| | || Sbjct 253220 GATTCCATTCTTGGGGTTCACGTAATGGAAAAGTTCGCTTATCACCTGCGAAAACTGCTT 253161 Query 63823 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 63882 | |||| |||||| |||||||| | ||| ||||||||||| | | | || || || || Sbjct 253160 GGTGGTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCAGG 253101 Query 63883 ATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGT 63942 ||| || || | || ||||||| |||||| ||||||| || |||||||| Sbjct 253100 ATGAACCGTGGTCATATACGCACAAGTTTCGGCAGCCAGATTGTCCAACTCCACCGTTGT 253041 Query 63943 TACACCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATC 64002 ||||| | || | || ||| | | | | ||||| | | ||| ||||| | Sbjct 253040 CACACCTTCGTACACACCGGAGATGATCCGCTGTGTAATTTTCACCGCATCGATATGCTT 252981 Query 64003 AGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 64059 || | || ||||||||||| || || | ||||||||||||||| |||| Sbjct 252980 AGGATCCAATCCATAACATAAACGCGAGATGCGTGCTGTGATTTTATCAAATTTGAC 252924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631809910400