Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 2e-30
seq3 123 2e-23
>seq1
Length=1828985
Score = 147 bits (162), Expect = 2e-30
Identities = 175/237 (74%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 24980 ATTTGTACAAAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCAC 25039
||||| |||| |||| |||||| || ||||||||||||||||| || || |||| ||
Sbjct 1304338 ATTTGAACAA---GGAAAAATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTAC 1304394
Query 25040 AGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGA 25099
| |||||||| || || |||||||| || ||||| || || ||||| ||
Sbjct 1304395 TCTGGAAGTGGAATCTTCGGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGA 1304454
Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159
||| |||||||| ||||| || | | |||||||| || |||||||| ||||||| |
Sbjct 1304455 AGGTATTCCACCAGACCAGCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAG 1304514
Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||| || || |||||||| ||||| ||||| || || || || ||||| || ||
Sbjct 1304515 AACTTTGTCTGACTACAATATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACT 1304571
Score = 127 bits (140), Expect = 2e-24
Identities = 175/244 (72%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || |||||||| || ||||||| | || ||||| || |||
Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || ||||| || || ||||| || || |||||||| |||||
Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| | | |||||||| || |||||||| ||||||| | ||| || || ||||||
Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATT--ATTATA 25236
|| ||||| ||||| || || || || ||||| || ||| | || || | || | |||
Sbjct 1304990 ATACAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTACGGGGCGGTATTTGAGTAATA 1305049
Query 25237 CTAT 25240
||||
Sbjct 1305050 CTAT 1305053
Score = 122 bits (134), Expect = 8e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || |||||||| || |||| || | ||||||||||| |||
Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || ||||| || || || || || || |||||||| |||||
Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| | | |||||||| || |||||||| ||||||| | ||| || || |||||
Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
|| ||||| ||||| || || || || ||||| ||
Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAG 1304796
>seq3
Length=955168
Score = 123 bits (136), Expect = 2e-23
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| | |||||||| | ||||| | || |||||||| |||
Sbjct 273937 ATGCAAATTTTCGTCAAGACCCTAACCGGTAAGACGATCACCCTTGAGGTGGAGTCTTCT 273878
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| || || ||| | || | ||| ||||| ||||| ||||| ||||||
Sbjct 273877 GACACCATCGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAAGGTATTCCTCCTGAC 273821
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||| | | || ||||| || || || || ||||| | | ||| || || |||
Sbjct 273820 CAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACTTTGTCGGACTAC 273761
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| || || || |||||||| | || || |||||||| | ||||| ||
Sbjct 273760 AACATCCAGAAGGAATCCACCTTGCACTTGGTGCTAAGATTGAGAGGTGG 273711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327873251560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |