Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq6 217 2e-51 >seq6 Length=784318 Score = 217 bits (240), Expect = 2e-51 Identities = 563/852 (66%), Gaps = 31/852 (4%) Strand=Plus/Plus Query 92791 ATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCC 92850 ||||||||| |||||||| ||| |||| ||||||| || ||||| ||||| || | Sbjct 310606 ATAACACCAGCCTTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCT 310665 Query 92851 AAAGATATC--------GAATTCACTAGTGATTGGATTCTTGGCGTTATAATACTTTTCA 92902 | || || ||| ||| || |||||||| | | ||||| |||| ||| Sbjct 310666 AGCGAAATGTTTTCCATGAAATCAAAAG-GATTGGATACCT-----TATAAAACTTGTCA 310719 Query 92903 CCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 ||| | ||| ||||||||||| |||||||| | || ||| ||||||||| Sbjct 310720 TTACCCAAAGCCACCAACAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCG 310779 Query 92963 CAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACA 93022 ||||| || || | ||| || || || || | || || | ||| ||| || Sbjct 310780 GCGTTCATGCCCAGCAATGATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCA 310839 Query 93023 ACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTG--TACGACATAAT 93080 || || ||| | | |||| | || || |||| ||| ||| | || || Sbjct 310840 ACCGCCTCTGTAATGATTCTT-----TCAACGATTTT-TGGATTTGGCTTATTTTTCAAG 310893 Query 93081 TGT----ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 ||| ||| || |||||||| || |||||||||||||| |||| | || | |||| Sbjct 310894 TGTGCAAACAGCAAACACGCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCA 310953 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 ||| ||||| ||||| || | || ||| || |||||||| || || | |||||| Sbjct 310954 TTGGAAAATGTCAAACCCGGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAA 311013 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256 ||| || ||||| | |||||| || |||||||| ||||| | | ||| | ||| | Sbjct 311014 GAACCTGAGAAAAAAACACCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGT 311073 Query 93257 GCGGAATTACTGCTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAG 93315 || || | ||| |||| ||| ||||| | || |||| || || || | Sbjct 311074 GCTTC-TTCGTCTTGAATCCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGAT 311132 Query 93316 TGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGAT 93375 |||||||| || || || | | || | || | | || ||||| ||||| || Sbjct 311133 AGTTTCGATTGCATTGAACAAAAACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAAT 311192 Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435 | || || || | || || || | || ||||| ||||| |||||||| ||||| Sbjct 311193 CAGTAGCGAGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACA 311252 Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTAT 93495 | | ||||||| | |||||||| ||| || | || || |||||||| |||||||| Sbjct 311253 TTTGGCTTCCGGACTTTGCACTTCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTAT 311312 Query 93496 ACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT 93555 ||||| |||||||||||||| || | | || || |||| |||| || || Sbjct 311313 CCCATCCGATGCTGCAAAAAACGCTAGCACCCGCGATAGGAAATAACGTTCATTTTCGTT 311372 Query 93556 AA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | | || | ||||||| || ||| || || ||||||| ||| || | |||||||| Sbjct 311373 CATGCGATTGTTCCAATCGTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAA 311432 Query 93613 CGATGCTTCTGC 93624 ||| || || || Sbjct 311433 CGACGCCTCGGC 311444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860632941760