Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 >seq1 Length=1828985 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 111183 AAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACC 111242 ||||||||| |||||||| || || |||| || || |||||||| ||||| |||| | Sbjct 1304350 AAAAATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATC 1304409 Query 111243 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111302 || || ||| | | || || || ||| ||||| ||||| |||| || Sbjct 1304410 TTCGGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGA 1304469 Query 111303 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111362 || ||||| | |||| ||| || ||||||||||||||| | |||| || | || || Sbjct 1304470 CCAGCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTA 1304529 Query 111363 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| ||||| ||||| || || || || ||| | | ||||||||||| Sbjct 1304530 CAATATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCGCGGTGG 1304580 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||| ||||| ||||||| || |||||||| ||||| ||| | Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | | || || || ||| || || || || |||| || || Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| | |||| |||||| ||||||||||||||| | |||| || | || || || Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| || || || || ||| | | |||| ||||| Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGATTGCGTGGTGG 1304808 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||| || ||||| ||||||| || ||||| || | || |||| | Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | | || || || ||| ||||| || || |||| || || Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| | |||| ||| || ||||||||||||||| | |||| || | || || ||| Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTG 111396 |||||||| ||||| || || || || ||| Sbjct 1304990 ATACAAAAGGAATCGACTCTCCACTTGGTG 1305019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423039876260800