Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 5e-25
seq1 116 3e-21
seq9 113 4e-20
>seq3
Length=955168
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||| || || || |||||||||| ||| |||| ||||| ||||| |
Sbjct 273940 AAGATGCAAATTTTCGTCAAGACCCTAACCGGTAAGACGATCACCCTTGAGGTGGAGTCT 273881
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || ||| | ||| || |||| || ||||| |||||||| |||||||| || ||
Sbjct 273880 TCTGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCTCCTGAC 273821
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
||||| | | || ||||| || || ||||| || || | | || | || || |||
Sbjct 273820 CAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACTTTGTCGGACTAC 273761
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || ||||||||| | || || || | ||||| | || |||
Sbjct 273760 AACATCCAGAAGGAATCCACCTTGCACTTGGTGCTAAGATTGAGAGGTGGT 273710
>seq1
Length=1828985
Score = 116 bits (128), Expect = 3e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| |||||||| || ||||| || || || || | ||||| ||||||||| |
Sbjct 1304350 AAAAATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATC 1304409
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || || | ||| | | || || |||||||||||||| ||||||||||| ||
Sbjct 1304410 TTCGGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGA 1304469
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|| ||| | | || ||||| || ||||| || || ||| | | || | || || ||
Sbjct 1304470 CCAGCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTA 1304529
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||| || ||||| ||||| || | || || || | || ||||||| |||
Sbjct 1304530 CAATATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCGCGGTGGT 1304581
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| ||||| || ||||| || || | ||||| |||||||| | |
Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || ||||| || ||||||||||||||||| || ||
Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| || || ||| | | || | || || ||||||
Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || || || | ||||||| || |||
Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGATTGCGTGGTGGT 1304809
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || ||||| || ||||| || || ||||||| || |||||| | |
Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || |||||||||||||||||||||||||| || ||
Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| || || ||| | | || | || || |||||
Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989
Query 22399 ATTCAAAAAGAATCCAC 22415
|| ||||| ||||| ||
Sbjct 1304990 ATACAAAAGGAATCGAC 1305006
>seq9
Length=718525
Score = 113 bits (124), Expect = 4e-20
Identities = 157/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || || || || ||||| || ||||| | ||||| ||| | | || ||| |
Sbjct 427481 TTTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCGGACACCAT 427422
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || ||||||||||||||||||||||| || || || || | |
Sbjct 427421 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGAGATT 427362
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || || || || ||| | || || | | ||| | ||||| |||||||| || ||
Sbjct 427361 GATCTTCGCTGGTAAGCAGCTTGAAGACGGCAGAACCTTGTCCGACTACAACATCCAGAA 427302
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| | || || || ||| ||||| | || |||
Sbjct 427301 GGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 427262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727877229560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |