Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 129 5e-25 seq1 116 3e-21 seq9 113 4e-20 >seq3 Length=955168 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || || || |||||||||| ||| |||| ||||| ||||| | Sbjct 273940 AAGATGCAAATTTTCGTCAAGACCCTAACCGGTAAGACGATCACCCTTGAGGTGGAGTCT 273881 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | ||| || |||| || ||||| |||||||| |||||||| || || Sbjct 273880 TCTGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCTCCTGAC 273821 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| | | || ||||| || || ||||| || || | | || | || || ||| Sbjct 273820 CAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACTTTGTCGGACTAC 273761 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||||||| | || || || | ||||| | || ||| Sbjct 273760 AACATCCAGAAGGAATCCACCTTGCACTTGGTGCTAAGATTGAGAGGTGGT 273710 >seq1 Length=1828985 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| |||||||| || ||||| || || || || | ||||| ||||||||| | Sbjct 1304350 AAAAATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATC 1304409 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || || | ||| | | || || |||||||||||||| ||||||||||| || Sbjct 1304410 TTCGGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGA 1304469 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || ||| | | || ||||| || ||||| || || ||| | | || | || || || Sbjct 1304470 CCAGCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTA 1304529 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || ||||| ||||| || | || || || | || ||||||| ||| Sbjct 1304530 CAATATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCGCGGTGGT 1304581 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| || ||||| || || | ||||| |||||||| | | Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||| || ||||||||||||||||| || || Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || ||||| || || ||| | | || | || || |||||| Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || | ||||||| || ||| Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGATTGCGTGGTGGT 1304809 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| || ||||| || || ||||||| || |||||| | | Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || |||||||||||||||||||||||||| || || Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || ||||| || || ||| | | || | || || ||||| Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| ||||| || Sbjct 1304990 ATACAAAAGGAATCGAC 1305006 >seq9 Length=718525 Score = 113 bits (124), Expect = 4e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| || || || || ||||| || ||||| | ||||| ||| | | || ||| | Sbjct 427481 TTTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCGGACACCAT 427422 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || ||||||||||||||||||||||| || || || || | | Sbjct 427421 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGAGATT 427362 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || || || || ||| | || || | | ||| | ||||| |||||||| || || Sbjct 427361 GATCTTCGCTGGTAAGCAGCTTGAAGACGGCAGAACCTTGTCCGACTACAACATCCAGAA 427302 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| | || || || ||| ||||| | || ||| Sbjct 427301 GGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 427262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727877229560