Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq9 161 2e-34 seq3 161 2e-34 seq1 154 3e-32 >seq9 Length=718525 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| || || |||||||| || ||||| | || || || || Sbjct 427277 CAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTTCTGCCGTC 427336 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | |||||| || ||||| || | ||| || ||||| || ||||| || |||||||| Sbjct 427337 TTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCCTCCTTGTC 427396 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 427397 TTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCCAAAGTGATGGT 427456 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||||||||| || Sbjct 427457 CTTACCAGTCAAGGTCTTGACAAA 427480 >seq3 Length=955168 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | ||||| || || |||||||| || || || | || || || ||||| Sbjct 273729 ACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCC 273788 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||||||| || || || || | ||| |||||||| || ||||| ||||||||||| ||| Sbjct 273789 AACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGA 273848 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | |||||| ||||||||||| | || || || || | |||||| || || Sbjct 273849 ATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATCGTCTTA 273908 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||||||||| || ||||| Sbjct 273909 CCGGTTAGGGTCTTGACGAAAATTTGCAT 273937 >seq1 Length=1828985 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || | | |||||||| || || || || |||||||| || || || || Sbjct 1304580 CCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGAC 1304521 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || || |||||||| || || || || || || || | |||||| ||||| |||||| Sbjct 1304520 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304461 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||||||||| ||| ||| || || ||||| | ||||| ||| Sbjct 1304460 ATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACT 1304401 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct 1304400 TCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATT 1304353 Score = 143 bits (158), Expect = 5e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || || || ||||| || || || || || | || || |||||||| Sbjct 1305018 ACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTCC 1304959 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || || || | |||||| ||||| |||||||| || |||||||||||| Sbjct 1304958 AATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGA 1304899 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||| ||| || || ||||| | ||||| || || | |||||||| ||| Sbjct 1304898 ATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCTTT 1304839 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||| || ||||| |||||||| Sbjct 1304838 CCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810 Score = 138 bits (152), Expect = 2e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || || || ||||||||||| || || || | || || |||||||| Sbjct 1304790 ACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCC 1304731 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || || || | |||||| ||||| |||||||| || ||||| || ||| Sbjct 1304730 AATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTGA 1304671 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||| ||| || || ||||| | || || ||||||| || ||||| ||| Sbjct 1304670 ATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTTT 1304611 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||| || || || |||||||| Sbjct 1304610 CCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622123513280