Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq9 161 2e-34
seq3 161 2e-34
seq1 154 3e-32
>seq9
Length=718525
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| || || |||||||| || ||||| | || || || ||
Sbjct 427277 CAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTTCTGCCGTC 427336
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | |||||| || ||||| || | ||| || ||||| || ||||| || ||||||||
Sbjct 427337 TTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCCTCCTTGTC 427396
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 427397 TTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCCAAAGTGATGGT 427456
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||||||| ||
Sbjct 427457 CTTACCAGTCAAGGTCTTGACAAA 427480
>seq3
Length=955168
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| | ||||| || || |||||||| || || || | || || || |||||
Sbjct 273729 ACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCC 273788
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|||||||| || || || || | ||| |||||||| || ||||| ||||||||||| |||
Sbjct 273789 AACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGA 273848
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | |||||| ||||||||||| | || || || || | |||||| || ||
Sbjct 273849 ATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATCGTCTTA 273908
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||||||||| || |||||
Sbjct 273909 CCGGTTAGGGTCTTGACGAAAATTTGCAT 273937
>seq1
Length=1828985
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || | | |||||||| || || || || |||||||| || || || ||
Sbjct 1304580 CCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGAC 1304521
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || || |||||||| || || || || || || || | |||||| ||||| ||||||
Sbjct 1304520 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304461
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||||||||||||||| ||| ||| || || ||||| | ||||| |||
Sbjct 1304460 ATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACT 1304401
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| || ||||| ||||| || | ||||| || || |||||||||
Sbjct 1304400 TCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATT 1304353
Score = 143 bits (158), Expect = 5e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || || || || ||||| || || || || || | || || ||||||||
Sbjct 1305018 ACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTCC 1304959
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| || || || || || || | |||||| ||||| |||||||| || ||||||||||||
Sbjct 1304958 AATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGA 1304899
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||| ||| || || ||||| | ||||| || || | |||||||| |||
Sbjct 1304898 ATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCTTT 1304839
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | ||| || ||||| ||||||||
Sbjct 1304838 CCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
Score = 138 bits (152), Expect = 2e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || || || || ||||||||||| || || || | || || ||||||||
Sbjct 1304790 ACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCC 1304731
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| || || || || || || | |||||| ||||| |||||||| || ||||| || |||
Sbjct 1304730 AATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTGA 1304671
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||| ||| || || ||||| | || || ||||||| || ||||| |||
Sbjct 1304670 ATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTTT 1304611
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | ||| || || || ||||||||
Sbjct 1304610 CCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622123513280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |