Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 113 1e-19 seq3 89.7 1e-12 >seq1 Length=1828985 Score = 113 bits (124), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| ||||| || || | || | || ||| ||||||||||| ||||| | Sbjct 1304580 CCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGAC 1304521 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| |||||||||||||| || |||| | || || ||| Sbjct 1304520 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304461 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| || || || || || ||| |||||||| || |||| || ||||| || Sbjct 1304460 ATACCTTCCTTGTCTTGAATCTT-GCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCAC 1304402 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || || ||||| || |||| |||||| || || ||||||||| Sbjct 1304401 TTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATT 1304353 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| ||||| ||||| | | || | || ||||| |||||||||||||| || Sbjct 1305001 TTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAA 1304942 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGT 288400 |||| | || || ||| || || || || || || || || ||| ||||||| Sbjct 1304941 AATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATCTT-GCTCTTCACGT 1304883 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || |||| || ||||| || || || ||||| ||||| ||||||| || || | Sbjct 1304882 TGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCA 1304823 Query 288461 CGAATATCTGCAT 288473 |||| |||||||| Sbjct 1304822 CGAAAATCTGCAT 1304810 Score = 89.7 bits (98), Expect = 1e-12 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | || ||||| ||||||||||| || || Sbjct 1304773 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAA 1304714 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGT 288400 |||| | || || ||| || || || |||||||| || || ||| ||||||| Sbjct 1304713 AATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTGAATCTT-GCTCTTCACGT 1304655 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || |||| || || || ||||| || || || ||||| ||||||| || || | Sbjct 1304654 TGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCA 1304595 Query 288461 CGAATATCTGCAT 288473 | || |||||||| Sbjct 1304594 CAAAAATCTGCAT 1304582 >seq3 Length=955168 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || ||||| | | || | |||||||| || || || || || || Sbjct 273746 TTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAA 273805 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | |||||| | || || ||||| || ||||| || || | || || || Sbjct 273806 GATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAATCTTGGACTTGACATT 273865 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || || || || || ||||||||||| ||||| || |||||||| Sbjct 273866 GTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGAC 273925 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 273926 GAAAATTTGCAT 273937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654037256272