Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 1e-19
seq3 89.7 1e-12
>seq1
Length=1828985
Score = 113 bits (124), Expect = 1e-19
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| ||||| || || | || | || ||| ||||||||||| ||||| |
Sbjct 1304580 CCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGAC 1304521
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | || ||||| |||||||||||||| || |||| | || || |||
Sbjct 1304520 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304461
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||| || || || || || ||| |||||||| || |||| || ||||| ||
Sbjct 1304460 ATACCTTCCTTGTCTTGAATCTT-GCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCAC 1304402
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| || || || ||||| || |||| |||||| || || |||||||||
Sbjct 1304401 TTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATT 1304353
Score = 93.3 bits (102), Expect = 1e-13
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| ||||| | | || | || ||||| |||||||||||||| ||
Sbjct 1305001 TTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAA 1304942
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGT 288400
|||| | || || ||| || || || || || || || || ||| |||||||
Sbjct 1304941 AATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATCTT-GCTCTTCACGT 1304883
Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460
| || |||| || ||||| || || || ||||| ||||| ||||||| || || |
Sbjct 1304882 TGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCA 1304823
Query 288461 CGAATATCTGCAT 288473
|||| ||||||||
Sbjct 1304822 CGAAAATCTGCAT 1304810
Score = 89.7 bits (98), Expect = 1e-12
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||| | | || | || ||||| ||||||||||| || ||
Sbjct 1304773 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAA 1304714
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGT 288400
|||| | || || ||| || || || |||||||| || || ||| |||||||
Sbjct 1304713 AATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTGAATCTT-GCTCTTCACGT 1304655
Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460
| || |||| || || || ||||| || || || ||||| ||||||| || || |
Sbjct 1304654 TGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCA 1304595
Query 288461 CGAATATCTGCAT 288473
| || ||||||||
Sbjct 1304594 CAAAAATCTGCAT 1304582
>seq3
Length=955168
Score = 89.7 bits (98), Expect = 1e-12
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| || ||||| | | || | |||||||| || || || || || ||
Sbjct 273746 TTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAA 273805
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | |||||| | || || ||||| || ||||| || || | || || ||
Sbjct 273806 GATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAATCTTGGACTTGACATT 273865
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || || || || || || ||||||||||| ||||| || ||||||||
Sbjct 273866 GTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGAC 273925
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 273926 GAAAATTTGCAT 273937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654037256272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |