Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 5e-13 seq1 89.7 5e-13 >seq9 Length=718525 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| ||| ||||| || | || || || || || || ||||| ||| | Sbjct 427263 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 427322 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || ||||| || |||||| ||||||||| |||||| || ||||| Sbjct 427323 AAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGA 427382 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || || ||||| | || | |||||||| | || ||| Sbjct 427383 ATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACT 427442 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 || | || | || || || |||| || || |||||| Sbjct 427443 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAAA 427481 >seq1 Length=1828985 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||||| || | || || || ||||| |||||||| || | Sbjct 1304580 CCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGAC 1304521 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | |||||||| || | ||||||| ||||| || || || Sbjct 1304520 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304461 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| || || ||| | ||||| | | ||||||| | || || Sbjct 1304460 ATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGT-CAATAGTGTCCGAAGATTCCAC 1304402 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || || || |||| ||| ||||||||||||||||| Sbjct 1304401 TTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || |||| | |||||| || | || || || ||||| || ||||| || | Sbjct 1304808 CCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGAC 1304749 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | |||||||| || | ||||||| ||||| || || || Sbjct 1304748 AAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304689 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||| ||| || || ||| | ||||| | | ||||| | | ||| || Sbjct 1304688 ATACCCTCCTTATCCTGAATCTTGCTCTTCACGTTGT-CAATAGTGTCAGAAGACTCCAC 1304630 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || || ||||||| ||||| |||||||||||||| Sbjct 1304629 TTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500657349760