Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 143 2e-29 seq3 98.7 9e-16 >seq1 Length=1828985 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || || | ||| | || || || ||||||||||||||||| || || Sbjct 1304583 ATACCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCA 1304524 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||||||||||||||| | ||||||| ||||||||| || Sbjct 1304523 GACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGT 1304464 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || |||||||| || || | || | || | ||||| ||||| || Sbjct 1304463 GGAATACCTTCCTTGTCTTGAATCTTGCTCTTCA-CGTTGTCAATAGTGTCCGAAGATTC 1304405 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||||| || || || || | ||| ||||||||||| ||||| Sbjct 1304404 CACTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||||||||| || || || | ||| | ||| ||||||||| Sbjct 1304784 TGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGT 1304725 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| || | ||||||| ||||||||| || ||||| || || ||||| ||||| || Sbjct 1304724 TTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTGAATCTTG 1304665 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | ||||| |||||||| ||||| ||||||| || || ||||| Sbjct 1304664 CTCTTCA-CGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTTTCCGGT 1304606 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| |||||||| ||||| Sbjct 1304605 CAAGGTTTTCACAAAAATCTGCAT 1304582 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || || | ||| | || || || ||||||||||| ||||| || || Sbjct 1305039 ATACCGCCCCGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCA 1304980 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||||||||||||||| | ||||||| ||||||||| || Sbjct 1304979 GACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGT 1304920 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || || |||||||| || || | || | || | ||||| ||||| || Sbjct 1304919 GGAATACCCTCCTTGTCTTGAATCTTGCTCTTCA-CGTTGTCAATAGTGTCAGAAGATTC 1304861 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || || ||||| | ||||| || ||||| ||||| Sbjct 1304860 CACCTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810 >seq3 Length=955168 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 |||| || |||||||| ||||| || || || | ||| | || ||||| || Sbjct 273735 TGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGC 273794 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||||| || ||||| || ||||| ||||| || || ||||| || Sbjct 273795 TTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAATCTTG 273854 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | |||||| |||||||| || || || || | ||| || |||||| Sbjct 273855 GACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATCGTCTTACCGGTT 273914 Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341 || || || || |||||||||||| Sbjct 273915 AGGGTCTTGACGAAAATTTGCATC 273938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003064399040