Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1 143 2e-29
seq3 98.7 9e-16
>seq1
Length=1828985
Score = 143 bits (158), Expect = 2e-29
Identities = 172/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| || || | ||| | || || || ||||||||||||||||| || ||
Sbjct 1304583 ATACCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCA 1304524
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||||||||||||||| | ||||||| ||||||||| ||
Sbjct 1304523 GACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGT 1304464
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| ||||| || |||||||| || || | || | || | ||||| ||||| ||
Sbjct 1304463 GGAATACCTTCCTTGTCTTGAATCTTGCTCTTCA-CGTTGTCAATAGTGTCCGAAGATTC 1304405
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||||| || || || || | ||| ||||||||||| |||||
Sbjct 1304404 CACTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354
Score = 127 bits (140), Expect = 2e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || |||||||||||||| || || || | ||| | ||| |||||||||
Sbjct 1304784 TGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGT 1304725
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
||||| || | ||||||| ||||||||| || ||||| || || ||||| ||||| ||
Sbjct 1304724 TTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTGAATCTTG 1304665
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | ||||| |||||||| ||||| ||||||| || || |||||
Sbjct 1304664 CTCTTCA-CGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTTTCCGGT 1304606
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| |||||||| |||||
Sbjct 1304605 CAAGGTTTTCACAAAAATCTGCAT 1304582
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || || | ||| | || || || ||||||||||| ||||| || ||
Sbjct 1305039 ATACCGCCCCGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCA 1304980
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||||||||||||||| | ||||||| ||||||||| ||
Sbjct 1304979 GACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGT 1304920
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || || |||||||| || || | || | || | ||||| ||||| ||
Sbjct 1304919 GGAATACCCTCCTTGTCTTGAATCTTGCTCTTCA-CGTTGTCAATAGTGTCAGAAGATTC 1304861
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | || || ||||| | ||||| || ||||| |||||
Sbjct 1304860 CACCTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
>seq3
Length=955168
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|||| || |||||||| ||||| || || || | ||| | || ||||| ||
Sbjct 273735 TGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGC 273794
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | ||||||| || ||||| || ||||| ||||| || || ||||| ||
Sbjct 273795 TTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAATCTTG 273854
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|||| || | |||||| |||||||| || || || || | ||| || ||||||
Sbjct 273855 GACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATCGTCTTACCGGTT 273914
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
|| || || || ||||||||||||
Sbjct 273915 AGGGTCTTGACGAAAATTTGCATC 273938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003064399040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |