Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 197 2e-45 >seq1 Length=1828985 Score = 197 bits (218), Expect = 2e-45 Identities = 893/1403 (64%), Gaps = 27/1403 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||| | || || ||||| |||||||| || ||||| || ||||| | |||||| Sbjct 254776 TACATGTTCGAGGTATAAGGCTCGAAGCACTCGTTATTACCTAAAATTTGAGAGGTGGAG 254717 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| || || | |||||| ||| | | ||| | ||| | Sbjct 254716 GCAGTTGGCATTGGAGCAACGAGAAGAGAGTTTCTCAAACCGCCTTTTTGAATCTTCGCT 254657 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 || | | ||||| || | | | ||| || | | ||||||||||||||| | Sbjct 254656 TTCAAAGTATCCCACTCCCATAGGTCCGTTGGCTTCTTGTTCCACATATCAAACTGTAAA 254597 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 ||||||||||| || || || ||||| || | | |||| || || | || | | Sbjct 254596 ATACCTTGGGAGGCAGGAGAACCCTCGAAGGATTGGTATGAACCTTCTTTCAAGGCTAGT 254537 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202 ||| | || || | || || || || || || || ||||| || || | | || Sbjct 254536 TCGTGGGATGCTTCCAAAGCGGCATGGTAGATAGTTTCGAAAATTTGAATGTTGAGTTCC 254477 Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGG 116262 || ||||| | ||| ||||| | || ||| | | || || |||| || | ||| || Sbjct 254476 TTAGCCTCTTGGGAGTCAAATGGGATACGCAAAACCATGAAAGCATCTGCCAAACCCTGT 254417 Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAA 116322 ||||| || | || || | |||||||||||| || || | || || || || || || Sbjct 254416 ACACCAAGTGCGATAGGTCTATGTCTCATATTGGAGTTCCTGGCAGTTTCGACTGGGTAG 254357 Query 116323 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 116382 | || | ||||| | | ||| || || | || || || || | ||| || |||||| Sbjct 254356 TAGTTACGGTCGATGATCTGATTCAGGTTATACGTAACCACTTTGGCGATGTCGTGAAGC 254297 Query 116383 TTTTCGTAAT--CAAAACTGCGAGTCT---CTTC---------ATTGACATACTTAGGAA 116428 |||||| | | | ||||| |||| | || | ||| | ||| | Sbjct 254296 TTTTCGAAGTTGTACCACTGC--GTCTTGCCGTCCGCCGAAGTTTCGACGAAAGAAGGTA 254239 Query 116429 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 116488 ||| || || |||| |||||| |||| || ||||| ||| ||||| | |||| Sbjct 254238 GGGAGACAGAAGCCAAATTACAAACAGCAGTTTCATCAGGCGCAGAATACTCGACGATTT 254179 Query 116489 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 116548 | |||||| |||||| ||| ||| ||||| |||||||| || || || ||| | Sbjct 254178 CGCAACACAAGTTTGAAGACTTGATGACACCCAAATTCTTTTGGTTCGATTTACGGTTGC 254119 Query 116549 ACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 116608 | ||||| ||||| ||||| | || || || ||||| ||||||| || |||||||| | Sbjct 254118 AGGCATCTTTGTACAGCATGAAAGGTGTACCAGTCTCTGTTTGGGCCTCTAGAATAGCAT 254059 Query 116609 TCCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG 116667 ||| || | | | || | | || | | || || |||| |||| | Sbjct 254058 ACCACAACTTTTGAGCCTTG-ATGGTCTTTCTACCACGACCTTCCTGAACGTAGCGCTCG 254000 Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727 || || || ||||||||| | || | | || | || ||||| || | | |||| || Sbjct 253999 TAAAGAGCTTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAG 253940 Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787 || |||| ||| | ||| |||| |||| | ||| || | ||| || ||||| || Sbjct 253939 AACAGAGTCCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGA 253880 Query 116788 GCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 116846 || | ||| | ||| | | || ||| ||| || | || || || || | || | Sbjct 253879 GCTGGGAACAAATCTCTGGCA-CGAATTTCCTCCTTACCGTGGTTTTTGCGGATGTCAAC 253821 Query 116847 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGC 116902 ||| || | || || | ||||| || || ||||||| || | | ||| ||| Sbjct 253820 AAAATCGAAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTT 253761 Query 116903 GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962 | |||| | || | || || | || || ||| || || |||| ||| || || | Sbjct 253760 G-TTACCACCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAA 253702 Query 116963 TACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGA 117022 ||| | || || ||||| || ||| |||| | | | | | | ||| | Sbjct 253701 GACCGTTGGAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAA 253642 Query 117023 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGT 117082 | |||| || ||||| || || || ||||| || || || | | | || ||| Sbjct 253641 TATGCAATCCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGT 253582 Query 117083 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142 | || || ||||| ||||| | || | || | | ||||| |||||| ||||| Sbjct 253581 AAATGCCGTCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGT 253522 Query 117143 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATC 117201 || ||||| || ||||| | || || | ||| || |||| ||| | | |||||| Sbjct 253521 GGGGAGTACCGGCATTGAACAACGTAGGAGACGCATGCGTGAA-GTACTTGAGTGACATC 253463 Query 117202 TTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGC 117261 || ||| || ||||| || || |||| | || |||||||||| | || ||| Sbjct 253462 AGATTGTAAGTTTCCAATACCCTGGCGATGTTGTTGCCATGAATACCGACAGCCACACGC 253403 Query 117262 ATAAACATGTATTGGGGTGTTTC 117284 |||| || | ||| ||| |||| Sbjct 253402 ATAATCAAATGTTGTGGTCTTTC 253380 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 163377 GCACCAAGATCTGGTCTCGCTGTGAAGAGCGGTATCCAAGTTGGTGCGGGTGTTGTGGAT 163436 || || ||||| || | || ||||| | ||| || | || || |||||||||||| Sbjct 1396155 GCCCCCAGATCAGGATTGGCCGTGAAAAACGGAATAAACACGGGAGCCGGTGTTGTGGAT 1396214 Query 163437 CCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGACACATGGATTTCCAA 163496 | || ||||| |||||||| ||| |||| ||||||||||| | ||| ||||| | Sbjct 1396215 CGCGATTACACCGGTGAAGTGAAAATCGTGCTCTTCAATCATTCAGACAAAGATTTTTCA 1396274 Query 163497 ATCAAAAAGGGGGATCGCATCGCGCAACTCATC 163529 | ||||||| || || | |||||||| ||| Sbjct 1396275 GTTCAAAAGGGCGACCGTGTTGCGCAACTGATC 1396307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507015947840