Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 132 1e-25 seq3 123 6e-23 >seq1 Length=1828985 Score = 132 bits (146), Expect = 1e-25 Identities = 166/227 (73%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||| || || | |||||||||||| |||||||||| |||||||||| |||||| Sbjct 1304574 CGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTT 1304515 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||||| || ||||| || || || | | |||||||| || ||| ||| Sbjct 1304514 CTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCT 1304455 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||||||| || | ||||| | | ||| || |||| Sbjct 1304454 TCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGA 1304395 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || ||||| || || | ||| || |||||||| || |||||| Sbjct 1304394 GTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTG---CATTTT 1304351 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | |||||||||||| |||||||||| ||||||||||| |||||| || || Sbjct 1304797 TCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 1304738 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| || ||||| || || || | | |||||||| || ||| || || Sbjct 1304737 ATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTT 1304678 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||||||||| ||||||| || | ||||| | | || || |||| || || Sbjct 1304677 ATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAAT 1304618 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || | |||||||||||||| || Sbjct 1304617 GGTCTTTCCGGTCAAGGTTTTCACAAAAATCTG 1304585 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||| || || | |||||||||||| |||||||| | |||||||||| |||||| Sbjct 1305030 CGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTT 1304971 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||||| || ||||| || || || | | |||||||| || ||| || Sbjct 1304970 CTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCC 1304911 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||||||| || | ||||| | | ||| || || | Sbjct 1304910 TCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGA 1304851 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | |||||||| ||||| || Sbjct 1304850 GTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTG 1304813 >seq3 Length=955168 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| | || || ||||| |||| ||||||||| | |||||| || || Sbjct 273722 TCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCC 273781 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| |||||| || || ||||| | | ||| ||||| ||| ||| ||||| Sbjct 273782 GTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTT 273841 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||||||||| ||| || |||| |||||| | | || || || | ||||| Sbjct 273842 GTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGAT 273901 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||| || || || || || |||||||| Sbjct 273902 CGTCTTACCGGTTAGGGTCTTGACGAAAATTTG 273934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921237481608