Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 1e-25
seq3 123 6e-23
>seq1
Length=1828985
Score = 132 bits (146), Expect = 1e-25
Identities = 166/227 (73%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| ||||| || || | |||||||||||| |||||||||| |||||||||| ||||||
Sbjct 1304574 CGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTT 1304515
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| |||||||||| || ||||| || || || | | |||||||| || ||| |||
Sbjct 1304514 CTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCT 1304455
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| ||||||| || | ||||| | | ||| || ||||
Sbjct 1304454 TCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGA 1304395
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || ||||| || || | ||| || |||||||| || ||||||
Sbjct 1304394 GTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTG---CATTTT 1304351
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| || || | |||||||||||| |||||||||| ||||||||||| |||||| || ||
Sbjct 1304797 TCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 1304738
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| || ||||| || || || | | |||||||| || ||| || ||
Sbjct 1304737 ATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTT 1304678
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||||||||| ||||||| || | ||||| | | || || |||| || ||
Sbjct 1304677 ATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAAT 1304618
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || | |||||||||||||| ||
Sbjct 1304617 GGTCTTTCCGGTCAAGGTTTTCACAAAAATCTG 1304585
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| ||||| || || | |||||||||||| |||||||| | |||||||||| ||||||
Sbjct 1305030 CGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTT 1304971
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| |||||||||| || ||||| || || || | | |||||||| || ||| ||
Sbjct 1304970 CTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCC 1304911
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| ||||||| || | ||||| | | ||| || || |
Sbjct 1304910 TCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGA 1304851
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || | |||||||| ||||| ||
Sbjct 1304850 GTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTG 1304813
>seq3
Length=955168
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| || || | ||| | || || ||||| |||| ||||||||| | |||||| || ||
Sbjct 273722 TCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCC 273781
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| |||||| || || ||||| | | ||| ||||| ||| ||| |||||
Sbjct 273782 GTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTT 273841
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||||||||| ||| || |||| |||||| | | || || || | |||||
Sbjct 273842 GTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGAT 273901
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||| || || || || || ||||||||
Sbjct 273902 CGTCTTACCGGTTAGGGTCTTGACGAAAATTTG 273934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921237481608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |