Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 232 8e-56 >seq1 Length=1828985 Score = 232 bits (256), Expect = 8e-56 Identities = 1154/1810 (64%), Gaps = 41/1810 (2%) Strand=Plus/Plus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 |||||||| |||||||||| ||| |||||| | ||| | | || | | || Sbjct 253320 TATTTTGGCTTCAAGACCCTTGAGCGCTCCTACCTTCTCAGAATCAACGGA--CAGGTTG 253377 Query 111606 --GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTG 111663 |||| ||||| | || | ||||| || || ||||||| ||||| | | || | Sbjct 253378 CAGAAAGACCACAACATTTGATTATGCGTGTGGCTGTCGGTATTCATGGCAACAACATCG 253437 Query 111664 ATTCTGTTTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCA 111722 || ||||| || ||| | |||||| | ||| |||| || || | || Sbjct 253438 CCAGGGTATTGGAAACTTACAATCTGATGTCACTCAAGTAC-TTCACGCATGCGTCTCCT 253496 Query 111723 ACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAAC 111782 || | ||||| || ||||| || || || ||||| || || | | || | Sbjct 253497 ACGTTGTTCAATGCCGGTACTCCCCACCCACAGATGTCGTCGTGCTTTTTGGTGGCTATG 253556 Query 111783 AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAG 111842 || || || |||||| | |||||||||| |||| | | |||||||| ||||| || Sbjct 253557 AAAGACGACTCAATCGACGGCATTTACGACACTTTGAAAGAATGTGCTATGATCTCTAAA 253616 Query 111843 TGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGA 111902 || || |||||||| |||| || || | | | | | | |||| ||| Sbjct 253617 ACTGCGGGCGGTATCGGATTGCATATTCACAACATTCGCTCGACCGGGTCTTACATTGCC 253676 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 |||||||| || || | ||| |||| || ||| |||| || || ||| ||| || Sbjct 253677 GGTACAAACGGAACTTCCAACGGTCTTATCCCCATGATTCGTGTCTTCAACAACACTGCT 253736 Query 111963 CGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCC 112018 ||||| || | |||| ||| | ||| || || | || | || |||||||| Sbjct 253737 CGCTACGTTGATCAAGGTGGTAA-CAAAAGACCAGGTGCTTTTGCTCTGTACCTTGAGCC 253795 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 |||||| | || || | || || |||| | || ||||| ||| | ||||| Sbjct 253796 ATGGCATTCAGACATTTTCGATTTTGTTGACATCCGCAAAAACCACGGTAAGGAGGAAAT 253855 Query 112079 GCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 || |||| | ||| | ||| | ||||| |||||||| || | || ||| | || || Sbjct 253856 TCG-TGCCAGAGATTTGTTCCCAGCTCTTTGGATTCCTGACTTGTTTATGCAAAGGGTCC 253914 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 |||| | |||| ||||| |||| || | |||| | || || || || | || | Sbjct 253915 AGGAAAATGGCGATTGGACTCTGTTCTCTCCAAGTGAAGCTCCAGGACTTGCTGACGTTT 253974 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGA 112257 || | ||||||||||| || ||| |||| | ||| |||| | | || Sbjct 253975 ATGGAGCAGAGTTTGAAGCTCTTTACGAGCGCTACGTTCAGGAAGGTCGTGGTAGAAAGA 254034 Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 | | ||| | ||||| | |||||||| || | ||||| ||||||||||||| Sbjct 254035 CCATCAAGGCTCAAAAGTTGTGGTATGCTATTCTAGAGGCCCAAACAGAGACTGGTACAC 254094 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | | ||||| |||||||| ||||| |||| || || ||||||||||||||||| | Sbjct 254095 CTTTCATGCTGTACAAAGATGCCTGCAACCGTAAATCGAACCAAAAGAATTTGGGTGTCA 254154 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437 ||||| ||| ||| | ||| |||||| | || | | | | ||||| || |||| Sbjct 254155 TCAAGTCTTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTGCGCCTGATGAAACTGCTG 254214 Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA----TC--CAGA-GACAA-A 112489 | ||||| | || || || | || || | || || || | || | ||| | Sbjct 254215 TTTGTAATTTGGCTTCTGTCTCCCTACCTTCTTTCGTCGAAACTTCGGCGGACGGCAAGA 254274 Query 112490 GACATTTG----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCT-A 112544 || | | | | ||||| || ||||| | | ||| || || | ||||| | Sbjct 254275 CGCAGTGGTACAACTTCGAAAAGCTTCACGACATCGCCAAAGTGGTTACGTATAACCTGA 254334 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 112604 | |||| | || || | || | ||||| || || ||||| | || || ||||||||| Sbjct 254335 ATCAGA-TCATCGACCGTAACTACTACCCAGTCGAAACTGCCAGGAACTCCAATATGAGA 254393 Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664 || | || || | || ||||| || ||| | || |||| ||||| ||| || | Sbjct 254394 CATAGACCTATCGCACTTGGTGTACAGGGTTTGGCAGATGCTTTCATGGTTTTGCGTATC 254453 Query 112665 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724 ||||||| ||| | || || |||||| |||| | || || || || || || || Sbjct 254454 CCATTTGACTCCCAAGAGGCTAAGGAACTCAACATTCAAATTTTCGAAACTATCTACCAT 254513 Query 112725 GCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784 |||||| | || || || | || | || ||| |||| || |||| ||| Sbjct 254514 GCCGCTTTGGAAGCATCCCACGAACTAGCCTTGAAAGAAGGTTCATACCAATCCTTCGAG 254573 Query 112785 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCT 112843 |||||||| || || ||||| | | || |||||||||| |||| || |||| | Sbjct 254574 GGTTCTCCTGCCTCCCAAGGTATTTTACAGTTTGATATGT-GGAACAAGAAGCCAACGGA 254632 Query 112844 TCACTACGACTGGGACGCTCT-CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 112902 | | || ||||| || | ||| | | |||| || ||| | | ||| || Sbjct 254633 CCTATGGGAGTGGGATACTTTGAAAGCGAAGATTCAAAAAG-GCGGTTTGAGAAACTCTC 254691 Query 112903 TTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 112962 || | | || ||||||||||| ||||||||| | ||||| || |||||||| || |||| Sbjct 254692 TTCTCGTTGCTCCAATGCCAACTGCCTCCACCTCTCAAATTTTAGGTAATAACGAGTGCT 254751 Query 112963 TTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTG 113022 | || || || || ||||||| || | | | | | |||| || || || | Sbjct 254752 TCGAGCCTTATACCTCGAACATGTACTCGCGTCGTGTCTTATCGGGTGAATTCCAAATCG 254811 Query 113023 TCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGG 113082 ||||| | || || ||||| || ||||| ||||| | | | ||||||| Sbjct 254812 TCAACCCCTACCTACTGCGCGACCTGGTCGATCTTGGTATCTGGGACGATGCTATGAAG- 254870 Query 113083 ATCTCATGGTGAAAGCGGGT---GGTTCCATTCAAAATATTGTGGATATTCCAGATGAAA 113139 |||||| | | | | | ||||| ||||| || | | | |||||| | | Sbjct 254871 -TCTCAT-ATCATTTCTGATAACGGTTCTATTCAGAACCTACCGAACATTCCACA-AAGC 254927 Query 113140 TT--AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGC 113197 || |||| || ||| || ||||||||| | ||| | ||||||| ||||| Sbjct 254928 TTGAAAGATCTT-TACAAGACCGTTTGGGAATTGTCTCAGAAAGCCATCATTGAGATGGC 254986 Query 113198 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCC 113257 || ||||||| | ||| |||||| || |||| | || | ||| || Sbjct 254987 AGCCGATCGTGCTTGCTACATTGACCAGTCTCAATCCTTAAACGTCCACATCCGTGCCCC 255046 Query 113258 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 113317 || ||| ||||| || |||||| | ||| |||||||||||||| | || ||||| Sbjct 255047 TACCATGGGTAAGCTAACTAGTATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGACGGG 255106 Query 113318 GATGTATTAC 113327 ||||| ||| Sbjct 255107 TATGTACTAC 255116 Score = 87.8 bits (96), Expect = 2e-12 Identities = 213/320 (67%), Gaps = 6/320 (2%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG- 16033 ||||||||||||||| ||| | ||| |||| || || || || ||||| | | Sbjct 826201 AAACCATCCATCTCTACCAACAACTGATTAAGTGTGGCCTCACGCTCGTCATTTGATCCA 826142 Query 16034 --CATACCACCAGCACTGCGT--TGCTTTCCC-ACGGCATCAATCTCATCAATGAAGACG 16088 ||| ||||| | | | | | ||||||| | ||||||||||||||| | || | | Sbjct 826141 CCCATGGCACCACCTTTCCCTCTTTCTTTCCCGATGGCATCAATCTCATCGACAAAAATG 826082 Query 16089 ATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 16148 ||| | ||| ||| | ||| |||||| ||||| |||||||| ||| || ||| Sbjct 826081 ATGGAAGGTGCCATTTTTCTGGCGTTTTCAAATAGATCGCGTACACGGGAGGCACCTACA 826022 Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 16208 || |||||||| || ||||| | | | || | | || || ||| || |||| Sbjct 826021 CCGACAAACATTTCGACAAATTCAGACCCAGATACTGACAAAAATGGAACACCAGCTTCA 825962 Query 16209 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 16268 || || | || || || | |||||| || |||||||| || | ||| | ||| Sbjct 825961 CCAGCCGTAGCCTTAGCAAGTAAAGTCTTTCCGGTACCTGGTGGGCCAGAGAGAATAGCA 825902 Query 16269 CCTCGTGGAATCTTGGCGCC 16288 || || || || ||||| || Sbjct 825901 CCGCGGGGGATTTTGGCTCC 825882 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 163557 TTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGGGTGTTATTG 163616 |||| || |||| || | || |||||| |||| || | || || |||||| | | Sbjct 1396153 TTGCCCCCAGATCAGGATTGGCCGTGAAAAACGGAATAAACACGGGAGCCGGTGTTGTGG 1396212 Query 163617 ATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACAAAGACTTT 163675 ||| ||| ||||| |||||||| ||| |||| |||||||||||| ||||||||| ||| Sbjct 1396213 ATCGCGATTACACCGGTGAAGTGAAAATCGTGCTCTTCAATCATTCAGACAAAGATTTT 1396271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742213777280