Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq6 262 4e-65 seq10 122 1e-22 seq1 96.9 4e-15 >seq6 Length=784318 Score = 262 bits (290), Expect = 4e-65 Identities = 596/895 (67%), Gaps = 5/895 (1%) Strand=Plus/Plus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| || || | |||||||||||| || ||||| || || || ||| || || | Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 ||||| |||||||| ||||| ||| ||||| | || | || || | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 | |||||| || ||||||| | |||| ||||||| ||| ||||| || | ||| Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909 || || || |||||| ||| | | || || || | || ||||||| || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857 Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969 | |||| | | | ||| || | | | ||| ||||| |||||| |||||| Sbjct 310858 CTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAAA 310917 Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029 || ||||| || || ||||| | || | ||||| |||||||| ||||| |||||| Sbjct 310918 TCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCATC 310977 Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089 | ||| | ||||| | |||||| || | ||||| || || || || || | |||||| Sbjct 310978 AAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTCA 311037 Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTC 19149 || ||||||||||| || | |||||| || || || || | | |||||||| | Sbjct 311038 ACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCTT 311097 Query 19150 AGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATAC 19209 | ||||| | |||||| | ||| | || || || || || | ||| || | | || Sbjct 311098 ATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAAC 311157 Query 19210 ATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGA 19269 || || | | || || | || | ||| |||| || ||| | || || ||| Sbjct 311158 TCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTGA 311217 Query 19270 ATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCA 19329 || ||||| || || |||||||||||||||||| | ||||| | | || |||||| Sbjct 311218 ATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTCA 311277 Query 19330 CTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCT 19389 | | || |||| |||| |||||| || ||||| ||||| ||||||||||| ||| Sbjct 311278 GCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGCT 311337 Query 19390 AATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATG----TATTCCAATCATTAAT 19445 | || | | |||| ||||| | ||| ||| | |||||||| | || Sbjct 311338 AGCACCCGCGATAGGAAATAACGTTCAT-TTTCGTTCATGCGATTGTTCCAATCGTGTAT 311396 Query 19446 ATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACAT 19505 ||| || |||| ||| | ||| || | |||||||| || ||||| || |||||| Sbjct 311397 ATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAGGC 311456 Query 19506 GTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCT 19560 | ||| || ||| | || | || || || | ||| ||||| |||||||||| Sbjct 311457 TTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCTGCGTTTATTTTCT 311511 >seq10 Length=558261 Score = 122 bits (134), Expect = 1e-22 Identities = 311/462 (67%), Gaps = 16/462 (3%) Strand=Plus/Plus Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270 |||| || |||||||| ||||| || || |||| ||| | | |||| ||| || | Sbjct 195010 TCATGAAGATATCTGGAATCCATAGGGCGCAGAATAGATCGCGCGCCCTTAATTCCTCTT 195069 Query 48271 TGCCACTATTCCTTTTAAGTTC-AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAA 48329 ||||| || | ||||| |||||| || | | || | ||||||||| ||||| Sbjct 195070 TGCCATGGTTTTTGCGAAGTTGTAAGAAA-TCGAAAACGTCCGAATGCCATGGCTCTAAG 195128 Query 48330 TATATTGCCATTA-CACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATT 48388 || || || | | ||||||| |||||||| || || || || | |||||| |||||||| Sbjct 195129 TAGAT-GCAAAAAGCACCTGGGCGTTTATTTCCACCCTGGTCAACATATCTTGCAGTATT 195187 Query 48389 GTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATA 48448 ||| |||| || ||||| || |||| |||||||| | || |||| || || || || Sbjct 195188 GTTGAAAACCCTCAACATCGGTACAAGTCCATTTGACGTCCCGTTGGACCCTGATATGTA 195247 Query 48449 ACTTCCACTAGCTCTTATATT-ACTAATTGAAATACCTATACCACCTGCCATTTTAGATA 48507 | || | |||| ||||| || || ||| || || || || || ||| || | Sbjct 195248 AGAGCCCGTTCCTCTGATATTCGATACATG-AATCCCAATTCCTCCAGCGCCTTTCGAGA 195306 Query 48508 TTAGAGCACACCGTTT----AAGGGTATCATAAATTCCTTCTATACTATCATCTATCATA 48563 | | |||| |||| ||| || |||||| || || || ||| || ||||| Sbjct 195307 TCATAGCA----GTTTTATGAAGCGTGCGATAAATACCATCGATTGAATCCTCCATCATG 195362 Query 48564 TTTAATAGAAAACAACTAGACATTTGC-GGATGACAAGTTCCTGAATTAAATAATGTTGG 48622 | ||||||||| |||| | | || | || || || | ||||| | || || Sbjct 195363 CCCACTAGAAAACAGGATGACAGGTACTGGTTCAC-CGTACCAGCGTTAAAAAGGGTCGG 195421 Query 48623 AGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGT 48664 ||||||||||| || |||| ||| | ||| | |||||| Sbjct 195422 TGATGCATGAATGAAGTATTTGCGTGACATCAAGTCATATGT 195463 >seq1 Length=1828985 Score = 96.9 bits (106), Expect = 4e-15 Identities = 432/680 (64%), Gaps = 6/680 (1%) Strand=Plus/Minus Query 48126 TCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGAC 48185 ||||| || | ||||| || | | | | || ||| |||| | ||| | | || | | Sbjct 253990 TCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGTC 253931 Query 48186 CAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAAT 48245 ||||| ||| | | || || |||||| | || || |||||||||||| || Sbjct 253930 CAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAAC 253871 Query 48246 AAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATT 48305 ||||| || | | | ||| || || || || | | |||| ||| || | Sbjct 253870 AAATCTCTGGCACGAATTTCCTCCTTACCGTGGTTTTTGCGGATGTCAACAAAATCGAAA 253811 Query 48306 ATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCT 48365 || || | ||||||||| || | || | || | ||||||||| ||| ||||| ||| Sbjct 253810 ATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCACCT 253751 Query 48366 TGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGAT 48425 ||||| | || | ||||| ||||| | || | | ||| |||| || ||| || || Sbjct 253750 TGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTGGAA 253691 Query 48426 ATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACC 48484 | || || || || | ||| ||| || | | | || || ||| || ||| || Sbjct 253690 GTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT-CC 253632 Query 48485 TATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTC 48544 ||||| || || ||||||| || | |||||| ||| | || || ||||| || || Sbjct 253631 GATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCGTC 253572 Query 48545 TATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCC 48604 || || ||| ||||| | | ||| || ||||| || || || ||| || Sbjct 253571 GATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTACC 253512 Query 48605 TGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGT 48664 | ||| || || || ||||| ||||| | || | || ||| | || || || || Sbjct 253511 GGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAAGT 253452 Query 48665 TTCAATAACAGAATCTATATCCCATTG--ATGTATACCTATAGATACACGCATTAACATA 48722 ||| | || | || | ||| ||| ||||| | || |||||||| | || | Sbjct 253451 TTCCAATACCCTGGCGATGT--TGTTGCCATGAATACCGACAGCCACACGCATAATCAAA 253394 Query 48723 TATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTT 48782 | ||| |||||||| ||| | || ||| | | ||| || || || | || Sbjct 253393 TGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAGGGTC 253334 Query 48783 TTAAAACCAAAATAGTTGTA 48802 || || |||||||||||||| Sbjct 253333 TTGAAGCCAAAATAGTTGTA 253314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108631367360