Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq6 262 4e-65
seq10 122 1e-22
seq1 96.9 4e-15
>seq6
Length=784318
Score = 262 bits (290), Expect = 4e-65
Identities = 596/895 (67%), Gaps = 5/895 (1%)
Strand=Plus/Plus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
||||| || || | |||||||||||| || ||||| || || || ||| || || |
Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
||||| |||||||| ||||| ||| ||||| | || | || || | | |
Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
| |||||| || ||||||| | |||| ||||||| ||| ||||| || | |||
Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
|| || || |||||| ||| | | || || || | || ||||||| || ||
Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGATT 310857
Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969
| |||| | | | ||| || | | | ||| ||||| |||||| ||||||
Sbjct 310858 CTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAAA 310917
Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029
|| ||||| || || ||||| | || | ||||| |||||||| ||||| ||||||
Sbjct 310918 TCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCATC 310977
Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089
| ||| | ||||| | |||||| || | ||||| || || || || || | ||||||
Sbjct 310978 AAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTCA 311037
Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTC 19149
|| ||||||||||| || | |||||| || || || || | | |||||||| |
Sbjct 311038 ACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCTT 311097
Query 19150 AGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATAC 19209
| ||||| | |||||| | ||| | || || || || || | ||| || | | ||
Sbjct 311098 ATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAAC 311157
Query 19210 ATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGA 19269
|| || | | || || | || | ||| |||| || ||| | || || |||
Sbjct 311158 TCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTGA 311217
Query 19270 ATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCA 19329
|| ||||| || || |||||||||||||||||| | ||||| | | || ||||||
Sbjct 311218 ATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTCA 311277
Query 19330 CTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCT 19389
| | || |||| |||| |||||| || ||||| ||||| ||||||||||| |||
Sbjct 311278 GCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGCT 311337
Query 19390 AATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATG----TATTCCAATCATTAAT 19445
| || | | |||| ||||| | ||| ||| | |||||||| | ||
Sbjct 311338 AGCACCCGCGATAGGAAATAACGTTCAT-TTTCGTTCATGCGATTGTTCCAATCGTGTAT 311396
Query 19446 ATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACAT 19505
||| || |||| ||| | ||| || | |||||||| || ||||| || ||||||
Sbjct 311397 ATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAGGC 311456
Query 19506 GTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCT 19560
| ||| || ||| | || | || || || | ||| ||||| ||||||||||
Sbjct 311457 TTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCTGCGTTTATTTTCT 311511
>seq10
Length=558261
Score = 122 bits (134), Expect = 1e-22
Identities = 311/462 (67%), Gaps = 16/462 (3%)
Strand=Plus/Plus
Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270
|||| || |||||||| ||||| || || |||| ||| | | |||| ||| || |
Sbjct 195010 TCATGAAGATATCTGGAATCCATAGGGCGCAGAATAGATCGCGCGCCCTTAATTCCTCTT 195069
Query 48271 TGCCACTATTCCTTTTAAGTTC-AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAA 48329
||||| || | ||||| |||||| || | | || | ||||||||| |||||
Sbjct 195070 TGCCATGGTTTTTGCGAAGTTGTAAGAAA-TCGAAAACGTCCGAATGCCATGGCTCTAAG 195128
Query 48330 TATATTGCCATTA-CACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATT 48388
|| || || | | ||||||| |||||||| || || || || | |||||| ||||||||
Sbjct 195129 TAGAT-GCAAAAAGCACCTGGGCGTTTATTTCCACCCTGGTCAACATATCTTGCAGTATT 195187
Query 48389 GTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATA 48448
||| |||| || ||||| || |||| |||||||| | || |||| || || || ||
Sbjct 195188 GTTGAAAACCCTCAACATCGGTACAAGTCCATTTGACGTCCCGTTGGACCCTGATATGTA 195247
Query 48449 ACTTCCACTAGCTCTTATATT-ACTAATTGAAATACCTATACCACCTGCCATTTTAGATA 48507
| || | |||| ||||| || || ||| || || || || || ||| || |
Sbjct 195248 AGAGCCCGTTCCTCTGATATTCGATACATG-AATCCCAATTCCTCCAGCGCCTTTCGAGA 195306
Query 48508 TTAGAGCACACCGTTT----AAGGGTATCATAAATTCCTTCTATACTATCATCTATCATA 48563
| | |||| |||| ||| || |||||| || || || ||| || |||||
Sbjct 195307 TCATAGCA----GTTTTATGAAGCGTGCGATAAATACCATCGATTGAATCCTCCATCATG 195362
Query 48564 TTTAATAGAAAACAACTAGACATTTGC-GGATGACAAGTTCCTGAATTAAATAATGTTGG 48622
| ||||||||| |||| | | || | || || || | ||||| | || ||
Sbjct 195363 CCCACTAGAAAACAGGATGACAGGTACTGGTTCAC-CGTACCAGCGTTAAAAAGGGTCGG 195421
Query 48623 AGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGT 48664
||||||||||| || |||| ||| | ||| | ||||||
Sbjct 195422 TGATGCATGAATGAAGTATTTGCGTGACATCAAGTCATATGT 195463
>seq1
Length=1828985
Score = 96.9 bits (106), Expect = 4e-15
Identities = 432/680 (64%), Gaps = 6/680 (1%)
Strand=Plus/Minus
Query 48126 TCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGAC 48185
||||| || | ||||| || | | | | || ||| |||| | ||| | | || | |
Sbjct 253990 TCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGTC 253931
Query 48186 CAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAAT 48245
||||| ||| | | || || |||||| | || || |||||||||||| ||
Sbjct 253930 CAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAAC 253871
Query 48246 AAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATT 48305
||||| || | | | ||| || || || || | | |||| ||| || |
Sbjct 253870 AAATCTCTGGCACGAATTTCCTCCTTACCGTGGTTTTTGCGGATGTCAACAAAATCGAAA 253811
Query 48306 ATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCT 48365
|| || | ||||||||| || | || | || | ||||||||| ||| ||||| |||
Sbjct 253810 ATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCACCT 253751
Query 48366 TGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGAT 48425
||||| | || | ||||| ||||| | || | | ||| |||| || ||| || ||
Sbjct 253750 TGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTGGAA 253691
Query 48426 ATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACC 48484
| || || || || | ||| ||| || | | | || || ||| || ||| ||
Sbjct 253690 GTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT-CC 253632
Query 48485 TATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTC 48544
||||| || || ||||||| || | |||||| ||| | || || ||||| || ||
Sbjct 253631 GATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCGTC 253572
Query 48545 TATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCC 48604
|| || ||| ||||| | | ||| || ||||| || || || ||| ||
Sbjct 253571 GATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTACC 253512
Query 48605 TGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGT 48664
| ||| || || || ||||| ||||| | || | || ||| | || || || ||
Sbjct 253511 GGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAAGT 253452
Query 48665 TTCAATAACAGAATCTATATCCCATTG--ATGTATACCTATAGATACACGCATTAACATA 48722
||| | || | || | ||| ||| ||||| | || |||||||| | || |
Sbjct 253451 TTCCAATACCCTGGCGATGT--TGTTGCCATGAATACCGACAGCCACACGCATAATCAAA 253394
Query 48723 TATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTT 48782
| ||| |||||||| ||| | || ||| | | ||| || || || | ||
Sbjct 253393 TGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAGGGTC 253334
Query 48783 TTAAAACCAAAATAGTTGTA 48802
|| || ||||||||||||||
Sbjct 253333 TTGAAGCCAAAATAGTTGTA 253314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108631367360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |