Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 197 1e-44 seq10 181 9e-40 seq4 107 2e-17 >seq1 Length=1828985 Score = 197 bits (218), Expect = 1e-44 Identities = 448/666 (67%), Gaps = 6/666 (1%) Strand=Plus/Minus Query 551922 GAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTA 551981 ||| | ||||| || || || ||||| | || || | |||||| | || || | Sbjct 635668 GAACGTGCCAAGCGCGCACTGTCATCGTCGGCACAGACGTCCATTGAAATCGACTCTCTT 635609 Query 551982 TTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCT 552041 || |||||| ||||| |||| || | | || || || ||||| | || || Sbjct 635608 TTCGAGGGATGTGATTTCTATACTTCTTTGACCAGAGCACGTTTCGAAGAATTGTGCGCT 635549 Query 552042 GATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGAT 552101 || || || | ||| | || || || ||| | || || ||||| | ||| | || Sbjct 635548 GACCTTTTCCGCTCCACATTGGACCCCGTGGAAAAGGTCTTGAGAGACGCTAAGCTCGAC 635489 Query 552102 AAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGC 552161 || || ||||| |||||||||||||||| || || || || | || |||||| ||| Sbjct 635488 AAGTCGCAAGTAGATGAAATTGTGCTTGTAGGAGGCTCAACTCGTATCCCTAAAGTTCAA 635429 Query 552162 GAAAT-GTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGA 552220 | | |||| ||| ||| ||||| ||| | ||| | || |||||||| Sbjct 635428 AAGCTCGTTACCGACTTTTTT-AATGGAAAAGAGCCAAACCGGTCCATCAACCCAGATGA 635370 Query 552221 GGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA-ACTGATGAAA 552279 ||| ||||| |||||||| || | ||||| || || | |||| | | | | || Sbjct 635369 GGCGGTTGCGTATGGTGCAGCCGTGCAAGCTGCCATCTTGACTGGTGACCAGTCCTCCAA 635310 Query 552280 AACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTG 552339 ||| || | | || | |||| || ||||| | || || ||| | ||||| | | Sbjct 635309 GACT-CAGGACTTGCTATTGTTAGACGTGGCTCCTTTGTCGCTAGGTATTGAAACGGCAG 635251 Query 552340 GAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTG 552399 | ||||| ||||| || || ||| ||||| |||| |||||| ||||||||| || | Sbjct 635250 GCGGTATCATGACCAAGCTGATCCCCAGAAACTCTACCATTCCTACTAAAAAATC-CGAG 635192 Query 552400 TA-TTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAA 552458 ||||| |||||| | ||||| ||| ||| ||| || ||| |||||||||| ||| Sbjct 635191 ACGTTTTCCACGTATGCTGATAACCAACCTGGTGTATTGATCCAAGTTTTTGAAGGTGAA 635132 Query 552459 AGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCT 552518 |||| ||||| || || ||| || |||| ||| | | || || |||||| Sbjct 635131 AGAACGAGGACTAAGGACAACAATTTGCTGGGTAAATTTGAGCTCAGCGGCATCCCTCCT 635072 Query 552519 GCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTG 552578 || |||||||| || || || ||||||||| | || ||| | ||||| ||||| |||||| Sbjct 635071 GCGCCTCGTGGTGTGCCTCAGATTGAAGTTTCGTTTGATTTAGATGCAAATGGTATTTTG 635012 Query 552579 AATGTG 552584 |||||| Sbjct 635011 AATGTG 635006 Score = 91.5 bits (100), Expect = 1e-12 Identities = 164/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 368594 TTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAG 368653 |||| |||| ||| | ||||| ||||| || || | ||| ||| ||||| |||| Sbjct 632551 TTTCTAGAAATAGATACTGGGGTACTCCTATCCCTATCTGGGTATCCGATGACTACGAAG 632492 Query 368654 AAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTA 368713 | ||||| ||| | || || | | |||||| || | |||||||||| || | || Sbjct 632491 AGATTGTCTGTGTTGGCTCGGTGGAGGAATTGAAAAAGCTATCTGGTGTTGAAGACATCC 632432 Query 368714 GTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTT 368773 ||| | || ||||| | ||| | |||| |||||||| ||| | || || ||| Sbjct 632431 AAGATCTTCACCGTGATACCGTGGATAAAATTACCATTCCATCGAAGCAGGGCAAGGGTA 632372 Query 368774 TATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATG 368833 | || |||| | ||| || || || ||||||||||| || ||||||||||||| Sbjct 632371 CGCTAAAGAGAATTGAGGAAGTCTTTGACTGTTGGTTTGAATCTGGGTCTATGCCTTATG 632312 >seq10 Length=558261 Score = 181 bits (200), Expect = 9e-40 Identities = 564/857 (66%), Gaps = 42/857 (5%) Strand=Plus/Minus Query 551755 TCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAG 551814 ||||||| ||| ||||| || || || ||| || |||| | ||||| |||| Sbjct 251503 TCGAAGACGGTATCTTTGAAGTCAAGGCCACCGCTGGTGACACTCACTTGGGTGGTGAAG 251444 Query 551815 ATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAA--- 551869 |||| || || ||| |||| | || | |||| |||| || || || || ||||| Sbjct 251443 ATTTCGACAACAGATTGGTTAACCAC--TTTGTTCAAGAATTCAAGCGTAAGAACAAGAA 251386 Query 551870 --AGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAACTGCTTGCGAAA 551925 | |||| || ||| |||||| | | | | ||||||||||||||||||| Sbjct 251385 GGACTTGACCT--CTAA-----CCAAAGAGCCTTGAGAAGACTAAGAACTGCTTGCGAAA 251333 Query 551926 GAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTG 551985 ||||||| || || | |||||| | |||||||| | || ||| | || || || |||| Sbjct 251332 GAGCCAAGAGAACTTTGTCATCTTCTGCTCAAACCTCGATCGAAATCGACTCTTTGTTTG 251273 Query 551986 AGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATC 552045 | || ||||| | || | || | || |||| ||| ||||| | ||| |||| Sbjct 251272 AAGGTATTGACATGTACACATCCATCACCAGAGCCAGATTCGAAGAATTGTGTGCTGACT 251213 Query 552046 TCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAAT 552105 | || ||| || || || || || || | || || ||||| | ||| | || |||| Sbjct 251212 TGTTCAGATCCACTATCGACCCTGTCGAGAAGGTGTTGAGAGACGCCAAGTTGGACAAAT 251153 Query 552106 CCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA 552165 | |||| || ||||| || | || ||||| || || |||||||| ||| || ||| Sbjct 251152 CTCAAGTCCACGAAATCGTTTTGGTCGGTGGTTCCACCAGAATTCC-AAAGGTCCAGAA- 251095 Query 552166 TGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGG 552222 ||| ||| || ||||| |||||| || ||| | | || |||||||||| Sbjct 251094 -GTTGGTCTCTGACTACTTCAACGGTAAAGAACCAAACAGATCCATCAACCCAGATGAGG 251036 Query 552223 CTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG--GACAAACTGATGAAAA 552280 | ||||| || |||||||| | ||||| || || | ||| ||| || | | || Sbjct 251035 CCGTTGCTTACGGTGCCGCCGTCCAAGCCGCCATCTTGACTGGTGACCAA-TCTTCCAAG 250977 Query 552281 ACTACAAAA--TATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTT 552338 ||| ||| | |||||| ||| |||||| | || | || | ||| | || || | | Sbjct 250976 ACT-CAAGACCTATTGTTGTTG--GATGTTGCCCCATTGTCCTTGGGTATTGAGACCGCT 250920 Query 552339 GGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGT 552398 || ||| | ||||| || | ||| ||||| | || || || || || ||| | Sbjct 250919 GGTGGTGTCATGACCAAATTGATCCCAAGAAACTCCACCATCCCAACCAAGAAGTCT-GA 250861 Query 552399 GTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGA 552457 | ||| || || || | || || || | | ||| ||||| | |||||||| || Sbjct 250860 GACTTTCTCCACTTACGCTGACAACCAGCCAGGTGTGTTGATTCAGGTCTTTGAAGGTGA 250801 Query 552458 AAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTTTAATTTAGAAGGTATTC 552513 |||| || || || || |||||| |||| || | || ||||||| Sbjct 250800 AAGAGCCAAGACGAAGGACAA----CAACTTGTTGGGTAAGTTCGACTTGAGCGGTATTC 250745 Query 552514 CTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAA 552573 | || || || | || || || ||||| ||||| ||||| ||| ||||||| || || | Sbjct 250744 CACCAGCCCCAAGAGGTGTTCCACAAATCGAAGTCACTTTTGATGTCGATGCTAACGGTA 250685 Query 552574 TTTTGAATGTGACTGCT 552590 | |||||||| ||||| Sbjct 250684 TCTTGAATGTCTCTGCT 250668 >seq4 Length=937132 Score = 107 bits (118), Expect = 2e-17 Identities = 312/473 (66%), Gaps = 18/473 (4%) Strand=Plus/Minus Query 552117 GAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAAGTT 552174 || |||||| | |||||||| || || ||||| || ||| || | || || || | Sbjct 641133 GACATTGTGTTGGTTGGTGGCTCCACCAGAATCCC-AAAGGTC-CAAAGCTTGCTAGAAT 641076 Query 552175 CTTATTTCAATGGTAAAAAA---TTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 ||||||||| |||||| || | || | || |||| || ||||||||||| || | Sbjct 641075 CTTATTTCAGTGGTAAGAAGGCCTCCAAGG---GTATTAACCCTGATGAGGCTGTCGCAT 641019 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 ||||||| ||| |||| || | | | | || || ||| |||| | || | | Sbjct 641018 ATGGTGCTGCAGTTCAGGCTGGTGTCTTGTCAGG------TGAAGAAAGTGTGGAAGACA 640965 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 |||| ||| | ||||| | ||||| || | ||| | || || ||| ||| | |||| Sbjct 640964 TTGTTCTTTTGGATGTCAACGCTCTAACTATGGGTATTGAGACCACTGGTGGTGTCATGA 640905 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGT 552411 || | ||| | ||||| || |||| || ||||| || | | || |||||| Sbjct 640904 CTCCATTAATCAAGAGAAACACCGCTATCCCAACCAAAAAGTCACAAATGTTCTCTACGG 640845 Query 552412 ATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTA 552471 || ||||| | | |||| |||||| | | || || |||||| | | | Sbjct 640844 CCGTCGACAATCAGCCAACCGTTATGATTCAAGTCTACGAGGGTGAAAGAGCCATGGCCA 640785 Query 552472 AAGATAATAATCAACTTGGT-ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGA 552530 | || || || |||||| | ||| | ||| || |||||| ||||||| | || Sbjct 640784 AGGACAACAACAGACTTGGAGAATTTGAGCTTACT-GGCATTCCTTCTGCTCCAAGAGGT 640726 Query 552531 GTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 || || || || ||||||||||| | | || |||||||| |||||||| || Sbjct 640725 GTTCCACAGATCGAAGTTACTTTTGCGCTAGACGCCAATGGTATTTTGAAGGT 640673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029294730771760