Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 5e-12
>seq1
Length=1828985
Score = 86.0 bits (94), Expect = 5e-12
Identities = 319/501 (64%), Gaps = 23/501 (5%)
Strand=Plus/Plus
Query 29824 TAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29883
|||||||| || || || || || || | ||||| || || || | | ||||||
Sbjct 1669740 TAGACGTGCGCATCGCCAAGAGTATGAATGAACTCGCCTGGCTCCATGTCACAGACGTGT 1669799
Query 29884 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 29943
|| ||||| | || | || | ||| || || ||||| || |||||||| |||||
Sbjct 1669800 GCGATCATTTTGGTTAAAAGTGCGTACGATGCAATATTAAAAGGAACCCCGAGTCCCATA 1669859
Query 29944 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCT---------CCGTCGCTC------ 29988
|| | ||||||||||| ||| ||||||| |||| | || || |||
Sbjct 1669860 TCGCAGGACCTCTGGTATAGCAGACACGACAGCTTTGACTTTTCGCCCTCCCTCTTGGGG 1669919
Query 29989 ------ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 30042
|| || || || | | ||||| ||||| | ||||| | || ||
Sbjct 1669920 AGAGTGACATAGAAATGCGAAAAAACATGGCAAGGAGGTAATGCCATTTTTGCAAAATCC 1669979
Query 30043 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30102
|| ||||| |||| || || || | | || ||||| | ||||| |||
Sbjct 1669980 GGTGGATTCCAAGCGCTCATAATAATTCTGCGATCCGTGGGGTTTGTTTTGATGCGGTGT 1670039
Query 30103 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTA 30161
| ||| ||||| || || | || || ||| || | | || ||||| ||
Sbjct 1670040 ATAACGTCTTGCAATTGGTCAAAACCTTGTCCACTGTAATCATCATCACACGTCCGA-TA 1670098
Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221
||||| |||||||||||||| |||||||| || || || ||||| |||||||| ||
Sbjct 1670099 TTCTGCACCGAAATGCCTCCATTGGAACCCATAAACAGGACCCAGATCTCCCTCACGTCT 1670158
Query 30222 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281
| || ||| ||||||||| | |||||||| ||||| | ||||| || || ||
Sbjct 1670159 ATCAGTCAATCCCAGCTTGTCCAAGTACTCTCTGGAGCCGTTTCCTTCCCATATTTTGAC 1670218
Query 30282 CCCCTTCTCGGAGAGCTCTTT 30302
|| | || || || | |||
Sbjct 1670219 TCCTTGTTCCGACAGTTTTTT 1670239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617480479352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |