Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 seq3 89.7 4e-13 >seq1 Length=1828985 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 |||||| || || || || ||||| |||||||| ||||| | | ||| | || || Sbjct 1304563 CACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304504 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 ||| || || || ||||| |||| || || || || | |||| || |||||||| Sbjct 1304503 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTG 1304444 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| || || | | || || || | ||||| |||| ||||| || || Sbjct 1304443 AATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGTCTT 1304384 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| |||||||| ||||||||||||||||| Sbjct 1304383 TCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||||| ||| | | |||||| || || || || ||||| |||||||| ||||| Sbjct 1305036 CCGCCCCGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGAC 1304977 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || ||||| || || || ||||| |||| || || || || | ||| Sbjct 1304976 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304917 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| |||||| || || | | || || || | |||||| Sbjct 1304916 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACC 1304857 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || ||||| ||||| ||||| || ||||||||||| Sbjct 1304856 TCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 |||||| || || || || ||||| || ||||| ||||| | | ||| | || || Sbjct 1304791 CACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTC 1304732 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 ||| || || || ||||| |||| || || || || | |||| |||||||| || Sbjct 1304731 CAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTG 1304672 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| || || | | || || || | |||||| |||| ||||| || || Sbjct 1304671 AATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTT 1304612 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| ||||| ||||| |||||||||||||| Sbjct 1304611 TCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582 >seq3 Length=955168 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 |||||| || | ||| || || || || ||||| || || | | ||| |||| || Sbjct 273728 CACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTC 273787 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 |||||||||||| ||||| |||| || |||||| || | |||| || |||||||| Sbjct 273788 CAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTG 273847 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| || ||| | | | || || | ||||||||| | || ||||| || Sbjct 273848 AATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATCGTCTT 273907 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || | || || || ||||| |||||| || Sbjct 273908 ACCGGTTAGGGTCTTGACGAAAATTTGCATCTTG 273941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937488575752