Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
seq3 89.7 4e-13
>seq1
Length=1828985
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616
|||||| || || || || ||||| |||||||| ||||| | | ||| | || ||
Sbjct 1304563 CACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304504
Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676
||| || || || ||||| |||| || || || || | |||| || ||||||||
Sbjct 1304503 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTG 1304444
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
|||||| || || | | || || || | ||||| |||| ||||| || ||
Sbjct 1304443 AATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGTCTT 1304384
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| |||||||| |||||||||||||||||
Sbjct 1304383 TCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||||| ||| | | |||||| || || || || ||||| |||||||| |||||
Sbjct 1305036 CCGCCCCGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGAC 1304977
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
| | ||| | || ||||| || || || ||||| |||| || || || || | |||
Sbjct 1304976 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304917
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||||||||||| |||||| || || | | || || || | ||||||
Sbjct 1304916 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACC 1304857
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | || || || ||||| ||||| ||||| || |||||||||||
Sbjct 1304856 TCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616
|||||| || || || || ||||| || ||||| ||||| | | ||| | || ||
Sbjct 1304791 CACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTC 1304732
Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676
||| || || || ||||| |||| || || || || | |||| |||||||| ||
Sbjct 1304731 CAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTG 1304672
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
|||||| || || | | || || || | |||||| |||| ||||| || ||
Sbjct 1304671 AATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCTT 1304612
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| ||||| ||||| ||||||||||||||
Sbjct 1304611 TCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
>seq3
Length=955168
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616
|||||| || | ||| || || || || ||||| || || | | ||| |||| ||
Sbjct 273728 CACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTC 273787
Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676
|||||||||||| ||||| |||| || |||||| || | |||| || ||||||||
Sbjct 273788 CAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTG 273847
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
|||||| || ||| | | | || || | ||||||||| | || ||||| ||
Sbjct 273848 AATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATCGTCTT 273907
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| || | || || || ||||| |||||| ||
Sbjct 273908 ACCGGTTAGGGTCTTGACGAAAATTTGCATCTTG 273941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937488575752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |