Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 131 3e-25 seq6 125 1e-23 >seq1 Length=1828985 Score = 131 bits (144), Expect = 3e-25 Identities = 333/504 (66%), Gaps = 2/504 (0%) Strand=Plus/Minus Query 222023 TTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTG 222082 || || | |||||| ||||| || | ||| || ||||| || || | || | ||||||| Sbjct 253921 TTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAACAAATCTCTG 253862 Query 222083 GTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCG 222142 | || |||||| |||| |||||| | | || | ||| || |||||||| | Sbjct 253861 GCACGAATTTCCTCCTTACCGTGGTTTTTGCGGATGTCAACAAAATCGAAAATGTCTGAA 253802 Query 222143 TGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACC 222202 ||||| ||||| || || | || | ||| || |||| ||||| ||||| ||||| || Sbjct 253801 TGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCACCTTGATCAACG 253742 Query 222203 ATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTT 222261 | | || | |||||||| |||| | || | || |||||||| ||||| Sbjct 253741 TAGCGAGC-AGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTGGAAGTTCCGTT 253683 Query 222262 GGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACC 222321 || || |||||| | ||| | | | ||| | || |||||||| || Sbjct 253682 TGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAATCCGATACCGCC 253623 Query 222322 GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTC 222381 || ||| |||||||| || || || | |||||| ||||| || || ||||| Sbjct 253622 CGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCGTCGATTGAGTC 253563 Query 222382 CTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAA 222441 || || | || || ||| || ||||||||||| | | || | || ||| || || Sbjct 253562 GTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTACCGGCATTGAA 253503 Query 222442 CAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGAC 222501 || ||| ||| || || || ||||| |||||||||| ||| || || | || Sbjct 253502 CAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAAGTTTCCAATAC 253443 Query 222502 TCTGGCGATGTTGTCCCCGTGAAT 222525 ||||||||||||| || ||||| Sbjct 253442 CCTGGCGATGTTGTTGCCATGAAT 253419 >seq6 Length=784318 Score = 125 bits (138), Expect = 1e-23 Identities = 358/536 (67%), Gaps = 21/536 (4%) Strand=Plus/Minus Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATCCA- 25570 |||||||| || || || ||||| ||||||| || ||| ||| || || || | Sbjct 311429 TGGACCGCGGAGGAAATCGATCTATCCAAGGATATACACGATTGGAACAATCGCATGAAC 311370 Query 25571 -AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629 || | || | |||| || | ||| | || || |||||||| || ||||| ||| Sbjct 311369 GAAAATGAACGTTATTTCCTATCGCGGGTGCTAGCGTTTTTTGCAGCATCGGATGGGATA 311310 Query 25630 GTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGT--GGAGGCCAAGT 25687 || ||||| |||||| || | ||| | |||||||| | || ||| ||||| | Sbjct 311309 GTCAACGAAAATCTGGTGGAAAATTTCTCTGCTGAAGTGCA--AAGTCCGGAAGCCAAAT 311252 Query 25688 GTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC 25747 |||| ||||| || || || || ||||| | ||||| ||| || | ||| | Sbjct 311251 GTTTTTACGGATTTCAAATCATGATGGAAAACATTCACTCCGAGACTTACTC---GCTAC 311195 Query 25748 TGATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804 |||| || ||||| | ||| | || || || |||| ||| ||||| Sbjct 311194 TGATTGATACCTACATCAAGGACCCCAAAGAAAGTGAGTTTTTGTTCAATGCAATCGAA- 311136 Query 25805 ACATACCCAGCA--TCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGA 25861 || || || ||| |||| ||||| | |||||||| | |||||| ||| | ||| Sbjct 311135 AC-TATCCCGCAAATCAAAGAAAAGGCTCAATGGGCCATAAGGTGGATTCAAGACGAAGA 311077 Query 25862 GCGCTACGTTT-GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGC 25920 || || ||| || || | |||| || ||||| ||||| || || | |||||| Sbjct 311076 A-GC-ACTTTTCGGTGAAAGATTGGTGGCTTTTGCAGCTGTTGAAGGTGTTTTTTTCTCA 311019 Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT 25980 ||||| ||||| ||||| ||||||||||| |||| || ||||| || || ||| Sbjct 311018 GGTTCTTTTGCAGCCATTTTCTGGCTCAAAAAGAAAGGTTTGATGCCGGGTTTGACATTT 310959 Query 25981 TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 ||||| |||||||| |||| || || ||| | || | |||||||| || |||| Sbjct 310958 TCCAATGAGCTCATTTGCAGAGATGAAGGTTTACATACGGATTTTGCGTGTTTGCT 310903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844521346560