Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 3e-25
seq6 125 1e-23
>seq1
Length=1828985
Score = 131 bits (144), Expect = 3e-25
Identities = 333/504 (66%), Gaps = 2/504 (0%)
Strand=Plus/Minus
Query 222023 TTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTG 222082
|| || | |||||| ||||| || | ||| || ||||| || || | || | |||||||
Sbjct 253921 TTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAACAAATCTCTG 253862
Query 222083 GTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCG 222142
| || |||||| |||| |||||| | | || | ||| || |||||||| |
Sbjct 253861 GCACGAATTTCCTCCTTACCGTGGTTTTTGCGGATGTCAACAAAATCGAAAATGTCTGAA 253802
Query 222143 TGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACC 222202
||||| ||||| || || | || | ||| || |||| ||||| ||||| ||||| ||
Sbjct 253801 TGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCACCTTGATCAACG 253742
Query 222203 ATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTT 222261
| | || | |||||||| |||| | || | || |||||||| |||||
Sbjct 253741 TAGCGAGC-AGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTGGAAGTTCCGTT 253683
Query 222262 GGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACC 222321
|| || |||||| | ||| | | | ||| | || |||||||| ||
Sbjct 253682 TGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAATCCGATACCGCC 253623
Query 222322 GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTC 222381
|| ||| |||||||| || || || | |||||| ||||| || || |||||
Sbjct 253622 CGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCGTCGATTGAGTC 253563
Query 222382 CTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAA 222441
|| || | || || ||| || ||||||||||| | | || | || ||| || ||
Sbjct 253562 GTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTACCGGCATTGAA 253503
Query 222442 CAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGAC 222501
|| ||| ||| || || || ||||| |||||||||| ||| || || | ||
Sbjct 253502 CAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAAGTTTCCAATAC 253443
Query 222502 TCTGGCGATGTTGTCCCCGTGAAT 222525
||||||||||||| || |||||
Sbjct 253442 CCTGGCGATGTTGTTGCCATGAAT 253419
>seq6
Length=784318
Score = 125 bits (138), Expect = 1e-23
Identities = 358/536 (67%), Gaps = 21/536 (4%)
Strand=Plus/Minus
Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATCCA- 25570
|||||||| || || || ||||| ||||||| || ||| ||| || || || |
Sbjct 311429 TGGACCGCGGAGGAAATCGATCTATCCAAGGATATACACGATTGGAACAATCGCATGAAC 311370
Query 25571 -AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629
|| | || | |||| || | ||| | || || |||||||| || ||||| |||
Sbjct 311369 GAAAATGAACGTTATTTCCTATCGCGGGTGCTAGCGTTTTTTGCAGCATCGGATGGGATA 311310
Query 25630 GTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGT--GGAGGCCAAGT 25687
|| ||||| |||||| || | ||| | |||||||| | || ||| ||||| |
Sbjct 311309 GTCAACGAAAATCTGGTGGAAAATTTCTCTGCTGAAGTGCA--AAGTCCGGAAGCCAAAT 311252
Query 25688 GTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC 25747
|||| ||||| || || || || ||||| | ||||| ||| || | ||| |
Sbjct 311251 GTTTTTACGGATTTCAAATCATGATGGAAAACATTCACTCCGAGACTTACTC---GCTAC 311195
Query 25748 TGATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804
|||| || ||||| | ||| | || || || |||| ||| |||||
Sbjct 311194 TGATTGATACCTACATCAAGGACCCCAAAGAAAGTGAGTTTTTGTTCAATGCAATCGAA- 311136
Query 25805 ACATACCCAGCA--TCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGA 25861
|| || || ||| |||| ||||| | |||||||| | |||||| ||| | |||
Sbjct 311135 AC-TATCCCGCAAATCAAAGAAAAGGCTCAATGGGCCATAAGGTGGATTCAAGACGAAGA 311077
Query 25862 GCGCTACGTTT-GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGC 25920
|| || ||| || || | |||| || ||||| ||||| || || | ||||||
Sbjct 311076 A-GC-ACTTTTCGGTGAAAGATTGGTGGCTTTTGCAGCTGTTGAAGGTGTTTTTTTCTCA 311019
Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT 25980
||||| ||||| ||||| ||||||||||| |||| || ||||| || || |||
Sbjct 311018 GGTTCTTTTGCAGCCATTTTCTGGCTCAAAAAGAAAGGTTTGATGCCGGGTTTGACATTT 310959
Query 25981 TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036
||||| |||||||| |||| || || ||| | || | |||||||| || ||||
Sbjct 310958 TCCAATGAGCTCATTTGCAGAGATGAAGGTTTACATACGGATTTTGCGTGTTTGCT 310903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844521346560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |