Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=1828985 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| || || || || |||||||| ||| ||| |||| Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| || || || || ||||| | || ||| || Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | || |||||||| ||||||||||||||| | |||| || | || || ||| Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||| ||||| ||||| ||| |||| | ||||| || || || || Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGATTGCGTGGTGGTAT 1304811 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 ||||||||| || |||||||| || || || || || |||||||| ||| |||| | Sbjct 1304350 AAAAATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATC 1304409 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 ||| || || | | | | | ||| || || ||||| || || | || ||| Sbjct 1304410 TTCGGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGA 1304469 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 || || ||| | || ||||| || ||||||||||||||| | |||| || | || || Sbjct 1304470 CCAGCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTA 1304529 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || ||||| ||||| ||||| ||| |||| | ||| | || || || || Sbjct 1304530 CAATATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCGCGGTGGTAT 1304583 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || ||||| || || || || ||||| || || |||| |||| Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| || || ||||| ||||| | || ||| || Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | || ||||| || ||||||||||||||| | |||| || | || || || Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||| ||||| ||||| ||| |||| | ||| |||| || || || Sbjct 1304990 ATACAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTACGGGGCGGTAT 1305039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404675569096