Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq10 210 1e-48 seq1 199 3e-45 seq4 122 6e-22 seq3 102 5e-16 >seq10 Length=558261 Score = 210 bits (232), Expect = 1e-48 Identities = 664/1013 (66%), Gaps = 36/1013 (4%) Strand=Plus/Minus Query 475338 TCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAG 475397 ||||||| ||| | || || | || || ||||| || | || | |||||||||| Sbjct 251503 TCGAAGACGGTATCTTTGAAGTCAAGGCCACCGCTGGTGACACTCACTTGGGTGGTGAAG 251444 Query 475398 ATTTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAA--- 475452 |||| || || ||| | || | || | |||| |||| |||||| | || || || Sbjct 251443 ATTTCGACAACAGATTGGTTAACCAC--TTTGTTCAAGAATTCAAGCGTAAGAACAAGAA 251386 Query 475453 --AGTTGATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGT 475510 | |||| || | | || | ||| || ||| | || ||||||||||| ||| | Sbjct 251385 GGACTTGACCTCTAACCAA-----AGAGCCTTGAGAAGACTAAGAACTGCTTGCGAAAGA 251331 Query 475511 GCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAA 475570 || ||| || || | || ||| || ||||||| | | ||| | || ||| | |||||| Sbjct 251330 GCCAAGAGAACTTTGTCATCTTCTGCTCAAACCTCGATCGAAATCGACTCTTTGTTTGAA 251271 Query 475571 GGAATTGATTATAATACTCTT--ATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATC 475628 || ||||| || ||| | | || || || || | ||| ||||| | ||| |||| Sbjct 251270 GGTATTGAC-ATG-TACACATCCATCACCAGAGCCAGATTCGAAGAATTGTGTGCTGACT 251213 Query 475629 TCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAAT 475688 | || ||| || || || || || || | || | ||||| | || | ||||||| Sbjct 251212 TGTTCAGATCCACTATCGACCCTGTCGAGAAGGTGTTGAGAGACGCCAAGTTGGACAAAT 251153 Query 475689 CACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAAT-AAGAGAA 475747 | |||||||| ||||| ||| | || || ||||| || ||||||||||| | ||| | Sbjct 251152 CTCAAGTCCACGAAATCGTTTTGGTCGGTGGTTCCACCAGAATTCCAAAGGTCCAGA-AG 251094 Query 475748 ATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCT 475807 || | || || || || |||||| | ||| | | || || ||||| || Sbjct 251093 TTGGTCTCTGACTACTTCAACGGTAAAGAACCAAACAGATCCATCAACCCAGATGAGGCC 251034 Query 475808 GTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT---CAATCAGACGAGAAA 475864 ||||| || || || || |||||||| || || || | ||| ||||| | || | Sbjct 251033 GTTGCTTACGGTGCCGCCGTCCAAGCCGCCATCTTGACTGGTGACCAATCTTCCAAG--A 250976 Query 475865 CTAAATA-ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGG 475923 || || | |||||| ||| || || | ||| | || || ||| |||| || | ||| Sbjct 250975 CTCAAGACCTATTGTTGTTG--GATGTTGCCCCATTGTCCTTGGGTATTGAGACCGCTGG 250918 Query 475924 AGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGT 475983 || | ||||| || | || ||||| | | |||||| ||| || || | Sbjct 250917 TGGTGTCATGACCAAATTGATCCCAAGAAACTCCACCATCCCAACCAAGAAGTCTGAGAC 250858 Query 475984 ATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAG 476043 || |||||||| |||| || || || ||| || || |||||||||||||||| Sbjct 250857 TTTCTCCACTTACGCTGACAACCAGCCAGGTGTGTTGATTCAGGTCTTTGAAGGTGAAAG 250798 Query 476044 AAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA-AGGTATTCCTCCTG 476102 | || || || || ||| | || | || | ||||| |||||||| || | Sbjct 250797 AGCCAAGACGAAGGACAACAACTTGTTGGGTAAGTTCGA-CTTGAGCGGTATTCCACCAG 250739 Query 476103 CTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTA 476162 | || ||||| ||||| ||||| ||||| ||||||||| | ||||| || ||||| | | Sbjct 250738 CCCCAAGAGGTGTTCCACAAATCGAAGTCACTTTTGATGTCGATGCTAACGGTATCTTGA 250679 Query 476163 ATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAATATAACTATTACAAACAATC 476222 |||| ||||| || || || | ||| | |||| || || || | ||| | Sbjct 250678 ATGTCTCTGCTGTCGAAAAGGGTACTGGTAAGTCTGAAAAGATTACCATCAACAACGACA 250619 Query 476223 GTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGATGAAGCCAAAGAGTTTGAAG 476282 |||||||| || | ||| | ||| | | |||||| || || || |||| | | Sbjct 250618 AGGGTAGATTGTCTAAGGAAGACATTGAGAGAATGGTTTCCGAGGCTGAAAAGTTCAAGG 250559 Query 476283 AAGCTGATAACAAGAGAAAAGCTGC---TATTGATGCAAAGAATGAACTTGAA 476332 ||| ||| | ||| ||||||| |||| ||| ||||| |||| ||| Sbjct 250558 AAGAAGATGAGAAG---GAAGCTGCCAGAATTGGTGCTAAGAACCAACTGGAA 250509 >seq1 Length=1828985 Score = 199 bits (220), Expect = 3e-45 Identities = 446/666 (67%), Gaps = 8/666 (1%) Strand=Plus/Minus Query 475505 GAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTT 475564 |||||||| ||||| || || || || | | || || | ||||| | || |||||| Sbjct 635668 GAACGTGCCAAGCGCGCACTGTCATCGTCGGCACAGACGTCCATTGAAATCGACTCTCTT 635609 Query 475565 TTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCT 475624 || || ||| ||||| ||||| | | || || || || ||||| | || || Sbjct 635608 TTCGAGGGATGTGATTTCTATACTTCTTTGACCAGAGCACGTTTCGAAGAATTGTGCGCT 635549 Query 475625 GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGAC 475684 || || || | ||| | || ||||| ||| | || | ||||| |||| || ||| Sbjct 635548 GACCTTTTCCGCTCCACATTGGACCCCGTGGAAAAGGTCTTGAGAGACGCTAAGCTCGAC 635489 Query 475685 AAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGA 475744 || || ||||| |||||||||| ||||||||||| ||||| | || || ||| | | Sbjct 635488 AAGTCGCAAGTAGATGAAATTGTGCTTGTAGGAGGCTCAACTCGTATCCCTAAAGTTCAA 635429 Query 475745 GAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAA 475804 | | || | | ||||||||| ||| || ||| | || || ||||| Sbjct 635428 AAGCTCGTTACCGACTTTTTTAATGGAAAAGAGCCAAACCGGTCCATCAACCCAGATGAG 635369 Query 475805 GCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT---CAATCAGACGAG 475861 || ||||| ||||| || || || ||||| || || || | ||| || || | || Sbjct 635368 GCGGTTGCGTATGGTGCAGCCGTGCAAGCTGCCATCTTGACTGGTGACCAGTCCTCCAAG 635309 Query 475862 AAACTAAATAATATTGTACTTGTT-GACGTAACTCCACTTTCATTAGGTCTTGAAACAGT 475920 | || | | | || ||||| ||||| |||| | || ||||| ||||||| | Sbjct 635308 A--CTCAGGACT--TGCTATTGTTAGACGTGGCTCCTTTGTCGCTAGGTATTGAAACGGC 635253 Query 475921 TGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAA 475980 || || || ||||| || || || |||||| || | || || |||||||| | Sbjct 635252 AGGCGGTATCATGACCAAGCTGATCCCCAGAAACTCTACCATTCCTACTAAAAAATCCGA 635193 Query 475981 AGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGA 476040 |||||||| ||| ||||||| ||| | |||| |||||| | ||||||||||| Sbjct 635192 GACGTTTTCCACGTATGCTGATAACCAACCTGGTGTATTGATCCAAGTTTTTGAAGGTGA 635133 Query 476041 AAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCC 476100 ||||| ||||| || || || || || | ||| | || || || ||||| Sbjct 635132 AAGAACGAGGACTAAGGACAACAATTTGCTGGGTAAATTTGAGCTCAGCGGCATCCCTCC 635073 Query 476101 TGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCT 476160 ||| || | || || ||||| ||||||||| | |||||| | ||||||||||||||| | Sbjct 635072 TGCGCCTCGTGGTGTGCCTCAGATTGAAGTTTCGTTTGATTTAGATGCAAATGGTATTTT 635013 Query 476161 TAATGT 476166 ||||| Sbjct 635012 GAATGT 635007 Score = 89.7 bits (98), Expect = 3e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| | ||||||| |||||| | ||| ||||| |||||||| | | ||| Sbjct 1304533 ATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTG 1304474 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 || || || ||||| |||||||||||||||||||| || || |||||||| || Sbjct 1304473 CTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTC 1304414 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | ||| || ||||| || || || || | |||||| || ||||| || Sbjct 1304413 CGAAGATTCCACTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTG 1304357 Score = 89.7 bits (98), Expect = 3e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 330946 AAAATATGACATGGAGGAAGTGCCATTTTATTAATATCCACTGGATTCCATAAATTAATA 331005 |||| ||| || ||||| | ||||||||| || |||| ||||||||| | ||| Sbjct 1669941 AAAACATGGCAAGGAGGTAATGCCATTTTTGCAAAATCCGGTGGATTCCAAGCGCTCATA 1670000 Query 331006 ATAATTCTTCTATCTGTCGGATTATTTTTAATTGCTTCGATACAtttttttAATTGATCA 331065 |||||||| | ||| || || || |||| || | ||| | || ||||| ||| Sbjct 1670001 ATAATTCTGCGATCCGTGGGGTTTGTTTTGATGCGGTGTATAACGTCTTGCAATTGGTCA 1670060 Query 331066 ATTCCTTGCCCGCTGTAATCTTTTTTACAATTTTCATATGTTGCACCAAAATATCTCATT 331125 | ||||| || |||||||| | | ||| | |||| |||||| |||| ||| | Sbjct 1670061 AAACCTTGTCCACTGTAATCATCATCACACGTCCGATATTCTGCACCGAAATGCCTCCAT 1670120 Query 331126 TGGAAACCATATCCAGGACCTATATCACC 331154 ||||| ||||| ||||||| | ||| || Sbjct 1670121 TGGAACCCATAAACAGGACCCAGATCTCC 1670149 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || || || ||||| || || || || || ||||| || || || || || | || Sbjct 636037 ACCGTCCCCGCTTATTTCAACGACTCCCAGCGACAAGCTACCAAGGACGCAGGGACCATC 635978 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 ||||| ||||| || | ||||| || || || || || ||||||||| ||||||||||| Sbjct 635977 GCAGGACTTAACGTCCTGCGTATCATCAACGAGCCCACTGCAGCCGCAATTGCTTATGGT 635918 Query 474866 CTTGATAAGAA 474876 || || ||||| Sbjct 635917 CTCGACAAGAA 635907 Score = 86.0 bits (94), Expect = 4e-11 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 290824 AAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACC 290883 ||||||| | | |||| || ||||| |||||||| | || || | || | || || Sbjct 1033613 AAGACCAAAGCTCAATGCTGCCGCTGTGGGTTCATTCACAACCCTGAGGACGTTCAGCCC 1033672 Query 290884 TGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGAC 290943 ||| |||||| | | |||| || || || | || | || |||||||||||||| || Sbjct 1033673 TGCCATTTTTCCAGCATCTTTGGTGGCTTGTCTCTGGGAGTCGTTAAAATAAGCAGGAAC 1033732 Query 290944 TGTAATAACAGCTTTTTCCACTTTCTT-TTTCAAATAATTTTCTGCCATTT 290993 |||||| |||||||| | | | |||| || || || ||||||||| ||| Sbjct 1033733 TGTAATGACAGCTTTGTTGA-TCTCTTCGTTTAAGTATTTTTCTGCCGTTT 1033782 >seq4 Length=937132 Score = 122 bits (134), Expect = 6e-22 Identities = 409/629 (65%), Gaps = 22/629 (3%) Strand=Plus/Minus Query 475546 TGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAAT---ACTCTTATTACAAGGGC 475602 ||| ||| |||| ||| || |||| || ||||| | | | ||||| | | || || Sbjct 641287 TGTGGAAATTGACTCTTTTGTTGACGGTATTGACTTCAGTGAAACTCTAA---CGAGAGC 641231 Query 475603 TAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCC-GTTGAACAAG 475661 ||| |||||||| || || | | | || | || || ||||| || |||||| ||| Sbjct 641230 TAAGTTTGAAGAAATGAATTTGGCTATGTTCAAGAAGACT-TTGAAGCCTGTTGAAAAAG 641172 Query 475662 TTCTCAGAGATTCTAAACTTGACAA--ATCACAAGTCCATGAAATTGTTCTTGTAGGAGG 475719 | | ||| || || |||| | ||| | | || ||||| | || || || Sbjct 641171 TATTGGCTGATGCTGGTGTTAACAAGGAGGACA--TTGACGACATTGTGTTGGTTGGTGG 641114 Query 475720 TTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTT 475779 || || ||||| ||||| | | |||| ||| ||||| | |||||| ||| Sbjct 641113 CTCCACCAGAATCCCAAAGGTCCAAAGCTTGCTAGAATCTTATTTCAGTGGTAAGAAGGC 641054 Query 475780 AAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCT 475837 | ||| ||| || |||||||| ||||| |||||||| ||||| || || || | | Sbjct 641053 C--TCCAAGGGTATTAACCCTGATGAGGCTGTCGCATATGGTGCTGCAGTTCAGGCTGGT 640996 Query 475838 ATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCA 475897 | || |||||| || | | | || | ||||| ||| | || || | | Sbjct 640995 GTCTTGTCAGGTGAAGAAAGTGTGGAAG------ACATTGTTCTTTTGGATGTCAACGCT 640942 Query 475898 CTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACT 475957 || | | ||| |||| || ||| || | |||||| | || | ||||| || Sbjct 640941 CTAACTATGGGTATTGAGACCACTGGTGGTGTCATGACTCCATTAATCAAGAGAAACACC 640882 Query 475958 CCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTA 476017 |||||||| |||||| ||| || | || || || || ||||| |||| || Sbjct 640881 GCTATCCCAACCAAAAAGTCACAAATGTTCTCTACGGCCGTCGACAATCAGCCAACCGTT 640822 Query 476018 ACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACT 476077 | || ||| ||| || ||||||||| | | || || || |||| ||||||| Sbjct 640821 ATGATTCAAGTCTACGAGGGTGAAAGAGCCATGGCCAAGGACAACAACAGACTTGGAGAA 640762 Query 476078 TTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTT 476137 ||| | ||| || |||||| ||||||| ||||| ||||| || || |||||||||||| Sbjct 640761 TTTGAGCTTACTGGCATTCCTTCTGCTCCAAGAGGTGTTCCACAGATCGAAGTTACTTTT 640702 Query 476138 GATATTGATGCAAATGGTATTCTTAATGT 476166 | | || || ||||||||| | || || Sbjct 640701 GCGCTAGACGCCAATGGTATTTTGAAGGT 640673 >seq3 Length=955168 Score = 102 bits (112), Expect = 5e-16 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 480608 AGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAAT 480667 ||||||| ||||| | ||||| |||||||| || | | ||||| ||||||||||| Sbjct 273773 AGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAAT 273832 Query 480668 TCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTT 480726 ||||||||||| |||||||| |||||| || || || |||| | | | | Sbjct 273833 ACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCA-CCT 273891 Query 480727 CAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| || || |||||||| || ||||| ||||||||||| Sbjct 273892 CAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTG 273934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178170523552