Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq10 123 1e-23
seq1 118 5e-22
>seq10
Length=558261
Score = 123 bits (136), Expect = 1e-23
Identities = 210/299 (70%), Gaps = 4/299 (1%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
||| || | |||||||||||| | || | |||| ||| | ||| || | ||| |||||
Sbjct 195011 CATGAAGATATCTGGAATCCATAGGGCGCAGAATAGATCGCGCGCCCTTAATTCCTCTTT 195070
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|| || || || || | ||||||||| |||| || || |||||||| ||||| ||
Sbjct 195071 GCCATGGTTTTTGCGAAGTTGTAAGAAATCGAAAACGTCCGAATGCCATGGCTCTAAGTA 195130
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
||| |||| |||| | ||| |||||| || || || ||||||||||| | ||
Sbjct 195131 GATGCAAAAAGCACCTGGGCGTTTATTTCCACCCTGGTCAACATATCTTGCAGTATTGTT 195190
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGA-ATCTTGG 26171
|||||| ||||||| || || | |||| ||| | ||| ||| | ||| || | |
Sbjct 195191 GAAAACCCTCAACATCGGTACAAGTCCATTTG-ACGTCCCGTTGGACCCTGATATGTAAG 195249
Query 26172 ATCCTGTCGATCTAATA-TCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229
| || || ||| ||| ||| | ||||||| || ||||| ||||| | ||| || ||
Sbjct 195250 AGCCCGTTCCTCTGATATTCGATA-CATGAATCCCAATTCCTCCAGCGCCTTTCGAGAT 195307
>seq1
Length=1828985
Score = 118 bits (130), Expect = 5e-22
Identities = 308/467 (66%), Gaps = 2/467 (0%)
Strand=Plus/Minus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| |||| | | |||||| |||||| || || | | |||||| || || ||||
Sbjct 253947 TTGGAGAGAACAGAGTCCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAA 253888
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||| | || || |||||||| || | ||||| || || ||||| || || |
Sbjct 253887 TCCAAAGAGCTGGGAACAAATCTCTGGCACGAATTTCCTCCTTACCGTGGTTTTTGCGGA 253828
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
|| | ||||| ||||| ||||| |||||||| || | || | ||||||| ||||
Sbjct 253827 TGTCAACAAAATCGAAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTG 253768
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||||| ||||||||||| ||||| | ||||| | ||||| || | ||| |
Sbjct 253767 GTCTTTTGTTACCACCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGG 253708
Query 26130 GAACTAATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATA 26188
| | ||| | ||| ||| ||||||||| | ||| | || || ||||| | |||
Sbjct 253707 GGA-TAAGACCGTTGGAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATG 253649
Query 26189 TCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACT 26248
| |||| ||| | ||||| || || || ||| || || ||||| ||| |
Sbjct 253648 TTGTGAATATGCAATCCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAA 253589
Query 26249 GTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAAT 26308
|| ||| |||| || | || || ||||||| | | ||||| || || || |
Sbjct 253588 GTGTCGTAAATGCCGTCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATC 253529
Query 26309 TGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGT 26355
|| | || | || || | ||| || || || || | ||||| ||
Sbjct 253528 TGTGGGTGGGGAGTACCGGCATTGAACAACGTAGGAGACGCATGCGT 253482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039925985800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |